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View Structure Prediction Details

Protein: SAC9_ARATH
Organism: Arabidopsis thaliana
Length: 1630 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SAC9_ARATH.

Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLHPPGGSK KTSVVVVTLD TGEVYVIASL LSKADTQVIY IDPTTGILRY NGKPGLDNFK  60
   61 SEREALDYIT NGSRGGVRSS VYARAILGYA VLGSFGMLLV ATRLNPSIPD LPGGGCVYTV 120
  121 AESQWVKIPL YNPQPQGKGE TKNIQELTEL DIDGKHYFCD TRDITRPFPS R

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLQSPDDEF VWNRWLSVPF KNIGLPEHCV ILLQGFAEYR PFGSSGQLEG IVALMARRSR  60
   61 LHPGTRYLAR GINSCSGTGN EVECEQLVWI PKRNGQSIAF NSYIWRRGTI PIWWGAELKM 120
  121 TAAEAEIYVA DRDPYKGSTE YYQRLSKRYD TRNLDAPVGE NQKKKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [338-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVPIVCVNLL RSGEGKSECI LVQHFEESMN FIKSSGKLPY TRVHLINYDW HASVKLKGEQ  60
   61 QTIEGLWMYL KSPTMAIGIS EGDYLPSRQR LKDCRGEVIC IDDIEGAFCL RSHQNGVIRF 120
  121 NCADSLDRTN AASFFGGLQV FVEQCRRLGI SLDTDLGYGH NSVNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [503-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGGYNAPLPP GWEKRADAVT GKSYYIDHNT KTTTWSHPCP DKPWKRLDMR FEEFKRSTIL  60
   61 SPVSELADLF LQQGDIHATL YTGSKAMHSQ ILNIFSEESG AFKQFSAAQK NMKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.0
Match: 1f8aB
Description: Mitotic rotamase PIN1; Mitotic rotamase PIN1, domain 2
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [617-965]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLQRRYKNAM VDSSRQKQLE MFLGMRLFKH LPSIPVQPLH VLSRPSGFFL KPVPNMSESS  60
   61 NDGSSLLSIK RKDITWLCPQ AADIVELFIY LSEPCHVCQL LLTISHGADD LTCPSTVDVR 120
  121 TGRHIEDLKL VVEGASIPRC ANGTNLLVPL PGPISSEDMA VTGAGARLHE KDTSSLSLLY 180
  181 DFEELEGQLD FLTRVVAVTF YPAGAVRIPM TLGQIEVLGI SLPWKGMFTC ERTGGRLAEL 240
  241 ARKPDEDGSP FSSCSDLNPF AATTSLQAET VSTPVQQKDP FPSNLLDLLT GEDSSSDPFP 300
  301 QPVVECIASG GNDMLDFLDE AVVEYRGSDT VPDGSVPQNK RPKDSGAHL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1i9yA
Description: Synaptojanin, IPP5C domain
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [966-1091]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLNCLKSLAG PNMAKKLEFV EAMKLEIERL RLNISAAERD RALLSIGIDP ATINPNSSYD  60
   61 ELYIGRLCKI ANALAVMGQA SLEDKIIASI GLEKLENNVI DFWNITRIGE GCDGGMCQVR 120
  121 AEVNKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1092-1237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVGSSTKSSR GESGSVFLCF QCMKKACKFC CAGKGALLLS KSYSRDTANG GGSLADVSAT  60
   61 SIGSDHYICK KCCSSIVLEA LIVDYVRVMV SLRRSGRVDN AGREALNEVF GSNITNHLAV 120
  121 RGQPSPNRED FNFLRQILGK EESLSE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1238-1384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPFASFLHKV ETATDSAPFF SLLTPLNLAS SNAYWKAPPS ADSVEAAIVL NTLSDVSSVI  60
   61 LLVSPCGYSD ADAPTVQIWA SSDINKEART LMGKWDVQSF IRSSPELSGS EKSGRAPRHI 120
  121 KFAFKNPVRC RIIWITLRLP RLGSSSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1385-1513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSLDKNINLL SLDENPFAPI PRRASFGATI ENDPCIHAKH ILVTGNTVRD KTLQSVESMS  60
   61 VRNWLDRAPR LNRFLIPLET ERPMENDLVL ELYLQPASPL AAGFRLDAFS AIKPRVTHSP 120
  121 SSDVVDIWD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1514-1630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTSVIMEDRH VSPAILYIQV SVLQEQYKMV TIAEYRLPEA RDGTKLYFDF PKQIQAQRVS  60
   61 FKLLGDVAAF TDEPAEAVDL SSRASPFAAG LSLANRIKLY YYADPYEVGK WTSLSSV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle