YRC Public Data Repository - Protein Structure Prediction

Protein:	SAC3_ARATH
Organism:	Arabidopsis thaliana
Length:	818 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAC3_ARATH.

Description	E-value	Query Range	Subject Range
SAC4_ARATH - Phosphoinositide phosphatase SAC4 OS=Arabidopsis thaliana GN=SAC4 PE=2 SV=1	687.0	[0..14]	[818..23]
gi\|215768478, gi... - gi\|51964610\|ref\|XP_507089.1\| PREDICTED P0007D08.10-1 gene product [Oryza sativa (japonica cultivar-g...	653.0	[0..1]	[816..1]
gi\|110225894, gi... - gi\|149027752\|gb\|EDL83246.1\| rCG38206, isoform CRA_b [Rattus norvegicus], gi\|114052238\|ref\|NP_0010405...	636.0	[0..6]	[809..3]
gi\|169775859 - gi\|169775859\|ref\|XP_001822396.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83771131 - gi\|83771131\|dbj\|BAE61263.1\| unnamed protein product [Aspergillus oryzae]	634.0	[0..2]	[794..127]
gi\|28923339, gi\|... - gi\|32418670\|ref\|XP_329813.1\| hypothetical protein [Neurospora crassa], gi\|28923339\|gb\|EAA32532.1\| hy... gi\|85104596 - gi\|85104596\|ref\|XP_961768.1\| hypothetical protein [Neurospora crassa OR74A]	633.0	[0..2]	[788..139]
gi\|73973735, gi\|... - gi\|73973735\|ref\|XP_532259.2\| PREDICTED: similar to SAC domain-containing protein 3 isoform 1 [Canis ...	633.0	[0..6]	[808..3]
gi\|167830421, gi... - gi\|167830421\|ref\|NP_001108096.1\| FIG4 homolog [Pan troglodytes], gi\|114608993\|ref\|XP_518683.2\| PREDI...	631.0	[0..11]	[808..95]
gi\|38111109, gi\|... - gi\|39971551\|ref\|XP_367166.1\| hypothetical protein MGG_07091 [Magnaporthe grisea 70-15], gb\|EAA56736....	630.0	[0..4]	[806..139]

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Predicted Domain #1

Region A:
Residues: [1-176]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTDDAGT TTHSLQEFKL FETQSNFYMI GWDGSGVYRV LKIDRLDPSE LNISQDSTHY  60
   61 TKKECYELLK RIHEGNKATG GLKLVTLCYG IIGFVKFLGP YYMLLITERR HIGDLFGHSV 120
  121 YAVSKSEIVA LHNSTVQCNF ANSRDENRYK RLLCMVDLTK DFFFSYSYNV MRSYQK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [177-334]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVCNYETGHN LYEKMFVWNE FLTRGIRHHL RNTLWTVALV YGFFKQASLS ESGKDFKITL  60
   61 IARRSRHNAG TRYLKRGVNR NGDVANDVET EQIVSEDVPE DHPMQISSVV QNRGSIPLFW 120
  121 SQETSRLNLK PDIVLSKKEP NYEATRLHFD NLVERYGN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [335-424]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIIILNLIKT KERRPRESIL REEFVNAIDF INKDLPEENR LRFLHWDLHK HFRSKTKNVL  60
   61 ALLCKVATCA LMLTDLFYYQ VTPAMTIEDS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [425-602]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSSSDAD TGDISPHTSS DDDNGDHDSL EKKSSRSKNI AYGKCDVKPP RLQSGVLRTN  60
   61 CIDCLDRTNV AQYAYGWAAL GQQLHVLGIR DVPAIELDDP LAISLMGLYE RMGDTLAHQY 120
  121 GGSAAHNKVF SERRGQWRAA TQSQEFLRTL QRYYNNAYMD ADKQDAINIF LGTFQPEQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [603-818]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMPAIWELRS NSLSNGRNGE MNIGKDERFL VKRCLSDGDF LHESCTPLSA MSSNHESMPQ  60
   61 KGFSAPLQHV SHILSESSSD IPVSNDVALS RCTPSMPRKQ LFGDVQKVHR FGSDQVYFGG 120
  121 EEDMSSVSNF VDIEWLSSEN PCENALFDRS SELTRNLTAE TSSTENSVNG VGQSAPTISE 180
  181 SGSSSSKGKE PMGTKIREDF PDSFKEWVAY GEALCH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.30103
Match:	1i9yA
Description:	Synaptojanin, IPP5C domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits