YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20517012, gi\|...
Organism:	Thermoanaerobacter tengcongensis MB4
Length:	212 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20517012, gi|....

Description	E-value	Query Range	Subject Range
gi\|76795737, gi\|... - gi\|76795737\|ref\|ZP_00778109.1\| Dak phosphatase [Thermoanaerobacter ethanolicus ATCC 33223], gi\|76589... gi\|241884366, gi... - gi\|241903300\|ref\|ZP_04788026.1\| dihydroxyacetone kinase, L subunit [Thermoanaerobacter brockii subsp...	233.0	[0..1]	[211..1]
gi\|242230507, gi... - gi\|242257974\|ref\|ZP_04802816.1\| dihydroxyacetone kinase, L subunit [Thermoanaerobacter sp. X513], gi... gi\|114805609, gi... - gi\|167039676\|ref\|YP_001662661.1\| dihydroxyacetone kinase, L subunit [Thermoanaerobacter sp. X514], g...	232.0	[0..1]	[211..1]
gi\|77960667 - gi\|77960667\|ref\|ZP_00824528.1\| COG2376: Dihydroxyacetone kinase [Yersinia mollaretii ATCC 43969]	226.0	[0..1]	[210..7]
gi\|238790049, gi... - gi\|77972929\|ref\|ZP_00828484.1\| COG2376: Dihydroxyacetone kinase [Yersinia frederiksenii ATCC 33641],...	226.0	[0..1]	[210..7]
gi\|238726542, gi... - gi\|77977975\|ref\|ZP_00833411.1\| COG2376: Dihydroxyacetone kinase [Yersinia intermedia ATCC 29909], gi...	226.0	[0..1]	[210..1]
gi\|77959677 - gi\|77959677\|ref\|ZP_00823694.1\| COG2376: Dihydroxyacetone kinase [Yersinia bercovieri ATCC 43970]	224.0	[0..1]	[210..1]
Y235_MYCCT - Putative kinase MCAP_0235 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 2...	222.0	[0..1]	[209..1]
gi\|19705146, gi\|... - gi\|19713081\|gb\|AAL93940.1\| Dihydroxyacetone kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 25...	222.0	[0..9]	[209..3]
gi\|53688515, gi\|... - gi\|53688515\|ref\|ZP_00110612.2\| COG2376: Dihydroxyacetone kinase [Nostoc punctiforme PCC 73102], gi\|1...	222.0	[0..2]	[209..1]
gi\|42492320 - gi\|42492320\|emb\|CAE76917.1\| glycerone kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi\|42560824 - gi\|42560824\|ref\|NP_975275.1\| glycerone kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]	222.0	[0..1]	[209..1]

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Predicted Domain #1

Region A:
Residues: [1-212]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVITKEDVLK VIDKIVEVIR ENKEYLTELD SAIGDADHGI NMDRGFEAVK QKLATIPENS  60
   61 DIGTILKTVG MTLVSTVGGA SGPLYGTAFM RAGQAVQGKT ELTEEDVVKI FEAALQGIKD 120
  121 RGKAQAGDKT MIDSIEPAYK ALKESLENNI ALPEALKRAV NAAKEGMEYT KNISARKGRA 180
  181 SYLGERSIGH IDPGATSSYL MIKALADVIN LL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.69897
Match:	2btdA
Description:	No description for 2btdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits