YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20807976
Organism:	Caldanaerobacter subterraneus subsp. tengcongensis
Length:	185 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20807976.

Description	E-value	Query Range	Subject Range
gi\|167040456, gi... - gi\|167040456\|ref\|YP_001663441.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X514], gi\|... gi\|255339225, gi... - gi\|255339225\|ref\|ZP_05380065.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter mathranii subsp... gi\|242256373, gi... - gi\|242256373\|ref\|ZP_04801265.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X513], gi\|2...	162.0	[0..2]	[180..4]
gi\|52784100, gi\|... - gi\|52784100\|ref\|YP_089929.1\| YnaD [Bacillus licheniformis ATCC 14580], gi\|52346602\|gb\|AAU39236.1\| Yn...	159.0	[0..4]	[179..1]
YP20_BACLI - Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1	157.0	[0..4]	[179..1]
gi\|42736945, gi\|... - gi\|42781024\|ref\|NP_978271.1\| acetyltransferase [Bacillus cereus ATCC 10987], gi\|42736945\|gb\|AAS40879...	151.0	[0..1]	[177..1]
gi\|254760853 - gi\|254760853\|ref\|ZP_05212877.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Aust... gi\|254752337 - gi\|254752337\|ref\|ZP_05204373.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Voll... gi\|254742807 - gi\|254742807\|ref\|ZP_05200492.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Krug... gi\|254738020 - gi\|254738020\|ref\|ZP_05195723.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. West... gi\|30257598, gi\|... - gi\|30262965\|ref\|NP_845342.1\| acetyltransferase [Bacillus anthracis str. Ames], gi\|30257598\|gb\|AAP268... gi\|21400893 - ref\|NP_656878.1\| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis str. A2012] gi\|190565082, gi... - gi\|190565082\|ref\|ZP_03018003.1\| acetyltransferase, GNAT family [Bacillus anthracis Tsiankovskii-I], ... gi\|218538046, gi... - gi\|218904124\|ref\|YP_002451958.1\| acetyltransferase, GNAT family [Bacillus cereus AH820], gi\|21853804... gi\|170705274, gi... - gi\|170705274\|ref\|ZP_02895739.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0389], gi\|1... gi\|172083826, gi... - gi\|177649874\|ref\|ZP_02932875.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0174], gi\|1... gi\|49185804, gi\|... - gi\|49185804\|ref\|YP_029056.1\| acetyltransferase [Bacillus anthracis str. Sterne], gi\|49179731\|gb\|AAT5... gi\|167515008, gi... - gi\|167637501\|ref\|ZP_02395781.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0193], gi\|1... gi\|47528305, gi\|... - gi\|47528305\|ref\|YP_019654.1\| acetyltransferase [Bacillus anthracis str. 'Ames Ancestor'], gi\|4750345... gi\|170671361, gi... - gi\|170685101\|ref\|ZP_02876326.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0465], gi\|1... gi\|165868685, gi... - gi\|165868685\|ref\|ZP_02213345.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0488], gi\|1... gi\|254722966 - gi\|254722966\|ref\|ZP_05184754.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. A105... gi\|167631811, gi... - gi\|167631811\|ref\|ZP_02390138.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0442], gi\|1... gi\|254685557 - gi\|254685557\|ref\|ZP_05149416.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. CNEV... gi\|229268951, gi... - gi\|229604543\|ref\|YP_002867247.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0248], gi\|... gi\|227007416, gi... - gi\|227814187\|ref\|YP_002814196.1\| acetyltransferase, GNAT family [Bacillus anthracis str. CDC 684], g...	151.0	[0..5]	[179..4]
gi\|47554691, gi\|... - gi\|47568595\|ref\|ZP_00239293.1\| acetyltransferase, GNAT family [Bacillus cereus G9241], gi\|47554691\|g...	151.0	[0..5]	[179..4]
gi\|229197181, gi... - gi\|229197181\|ref\|ZP_04323915.1\| Acetyltransferase, GNAT [Bacillus cereus m1293], gi\|228586294\|gb\|EEK... gi\|51975982, gi\|... - gi\|52142513\|ref\|YP_084316.1\| ribosomal-protein-alanine acetyltransferase [Bacillus cereus E33L], gi\|...	150.0	[0..5]	[179..4]
gi\|65320282 - gi\|65320282\|ref\|ZP_00393241.1\| COG1670: Acetyltransferases, including N-acetylases of ribosomal prot...	150.0	[0..5]	[179..15]
gi\|110169066, gi... - gi\|71676064\|ref\|ZP_00673807.1\| GCN5-related N-acetyltransferase [Trichodesmium erythraeum IMS101], g...	150.0	[0..5]	[183..11]

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Predicted Domain #1

Region A:
Residues: [1-185]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYQPVLETS RLILKKISLE DAEDMFEYAS DPEVTKYVSW EYHKNIEDSL KFINLLLSRY  60
   61 EKGEPSDWGL YLKENGKLIG TCGFLFIDEK NMVGEVGYVL GRKYWNKGIM TEAVRKVIEF 120
  121 GFEKLNLNRI QARCKVENIA SERVMQKVGM KFEGVLREAV FVKGRFWDMK MYSILKREYE 180
  181 KNREA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.522879
Match:	1nslA
Description:	Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.34977492703662	bayes_pls_golite062009
transferase activity	1.85190002724385	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
N-acyltransferase activity	1.18143103040425	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
N-acetyltransferase activity	0.796917859235554	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: