YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20515438, gi\|...
Organism:	Thermoanaerobacter tengcongensis MB4
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20515438, gi|....

Description	E-value	Query Range	Subject Range
gi\|242256226, gi... - gi\|242256226\|ref\|ZP_04801121.1\| glutamate formiminotransferase [Thermoanaerobacter sp. X513], gi\|242... gi\|114844566, gi... - gi\|167039053\|ref\|YP_001662038.1\| glutamate formiminotransferase [Thermoanaerobacter sp. X514], gi\|16...	499.0	[0..1]	[298..1]
gi\|42525812, gi\|... - gi\|42525812\|ref\|NP_970910.1\| formiminotransferase, putative [Treponema denticola ATCC 35405], gi\|418...	498.0	[0..1]	[298..2]
gi\|34396477, gi\|... - gi\|34540165\|ref\|NP_904644.1\| formiminotransferase-cyclodeaminase-related protein [Porphyromonas ging...	497.0	[0..1]	[298..3]
gi\|76797052, gi\|... - gi\|76797052\|ref\|ZP_00779395.1\| Formiminotransferase [Thermoanaerobacter ethanolicus ATCC 33223], gi\|... gi\|241904616, gi... - gi\|241904616\|ref\|ZP_04789298.1\| glutamate formiminotransferase [Thermoanaerobacter brockii subsp. fi...	496.0	[0..1]	[298..1]
gi\|28204345, gi\|... - gi\|28211902\|ref\|NP_782846.1\| glutamate formiminotransferase [Clostridium tetani E88], gi\|28204345\|gb...	492.0	[0..1]	[298..1]
gi\|94989413, gi\|... - gi\|94989413\|ref\|YP_597514.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS9429], gi\|94... gi\|94546810, gi\|... - gi\|94993302\|ref\|YP_601401.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS2096], gi\|94...	491.0	[0..1]	[297..1]
gi\|71911585, gi\|... - gi\|71911585\|ref\|YP_283135.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS5005], gi\|71... gi\|15675841, gi\|... - gi\|15675841\|ref\|NP_270015.1\| glutamate formiminotransferase [Streptococcus pyogenes M1 GAS], gi\|1362... GLFT_STRP1 - Glutamate formimidoyltransferase OS=Streptococcus pyogenes serotype M1 GN=M5005_Spy1772 PE=1 SV=1	490.0	[0..1]	[297..1]
gi\|209560199, gi... - gi\|209560199\|ref\|YP_002286671.1\| Glutamate formiminotransferase [Streptococcus pyogenes NZ131], gi\|2... gi\|21911310, gi\|... - gi\|21911310\|ref\|NP_665578.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS315], gi\|219... gi\|94991347, gi\|... - gi\|94991347\|ref\|YP_599447.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS10270], gi\|9... gi\|28896683, gi\|... - gi\|28896683\|ref\|NP_803033.1\| glutamate formiminotransferase [Streptococcus pyogenes SSI-1], gi\|28811... gi\|71803513, gi\|... - gi\|71904418\|ref\|YP_281221.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS6180], gi\|71...	490.0	[0..1]	[297..1]
gi\|94995260, gi\|... - gi\|94995260\|ref\|YP_603358.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS10750], gi\|9...	490.0	[0..1]	[297..1]
gi\|50904189, gi\|... - gi\|50915115\|ref\|YP_061087.1\| glutamate formiminotransferase [Streptococcus pyogenes MGAS10394], gi\|5...	490.0	[0..1]	[297..1]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQIIECVPN VSEGRDQEKI SELIKEVVST EGVKLLDYSS DKDHNRTVIT FVGDKEGVKE  60
   61 AAFKLIKKAS EIIDMRYHKG EHPRIGAVDV VPFVPVKNVT MEECVQIARE LGERVGKELN 120
  121 IPVYLYEEAA TTPERKNLEN IRRGEYEGFF EKIKQPEWKP DFGPSEMNPK SGAIVIGARN 180
  181 FLIAFNVNLG TNDIEIANKI AKAVRFSSGG YRYVKAMGVE LRERGIVQVS MNLTDFNKTP 240
  241 IYRVFETIKA EASRYGVNVV GSEIIGLVPS KALLDVADYY LRLENFSMDM VLENRIYE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	137.0
Match:	1tt9A
Description:	Structure of the bifunctional and Golgi associated formiminotransferase cyclodeaminase octamer
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits