YRC Public Data Repository - Protein Structure Prediction

Protein:	ENSCJAT00000016915
Organism:	Callithrix jacchus
Length:	113 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSCJAT00000016915.

Description	E-value	Query Range	Subject Range
gi\|73962567 - gi\|73962567\|ref\|XP_537361.2\| PREDICTED: similar to defender against cell death 1 [Canis familiaris]	3.0E-40	[1..113]	[1..113]
DAD1_BOVIN - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Bos taurus GN=DAD1 PE...	4.0E-40	[1..113]	[1..113]
DAD1_PIG - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Sus scrofa GN=DAD1 PE...	4.0E-40	[1..113]	[1..113]
gi\|1905979 - gi\|1905979\|gb\|AAC53098.1\| oligosaccharyltransferase subunit homolog [Mus musculus]	5.0E-40	[1..113]	[1..113]
gi\|60652889, gi\|... - gi\|60831017\|gb\|AAX36954.1\| defender against cell death 1 [synthetic construct], gi\|60654189\|gb\|AAX29...	7.0E-40	[1..113]	[1..113]
DAD1_PONPY - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 - Pongo pygmaeus (Orangu... DAD1_PONAB - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Pongo abelii GN=DAD1 ...	2.0E-39	[1..113]	[1..113]
gi\|14602573 - gi\|14602573\|gb\|AAH09798.1\| Defender against cell death 1 [Homo sapiens]	3.0E-39	[1..113]	[1..113]
DAD1_CHICK - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Gallus gallus GN=DAD1...	2.0E-38	[2..113]	[12..123]

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Predicted Domain #1

Region A:
Residues: [1-113]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASVVSVIS RFLEEYLSST PQRLKLLDAY LLYILLTGAL QFGYCLLVGT FPFNSFLSGF  60
   61 ISCVGSFILA VCLRIQINPQ NKADFQGISP ERAFADFLFA STILHLVVMN FVG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	75.267606
Match:	PF02109.7
Description:	No description for PF02109.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.956	0.192	integral to membrane	a.47.2	t-snare proteins

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits