YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|19703424, gi\|...
Organism:	Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Length:	274 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19703424, gi|....

Description	E-value	Query Range	Subject Range
gi\|27886451, gi\|... - gi\|34763775\|ref\|ZP_00144691.1\| Dihydroneopterin aldolase; 2-amino-4-hydroxy-6-hydroxymethyldihydropt...	333.0	[0..1]	[274..1]
gi\|18144683, gi\|... - gi\|18310004\|ref\|NP_561938.1\| dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropter...	303.0	[0..1]	[273..1]
gi\|82722943, gi\|... - gi\|82749218\|ref\|ZP_00911682.1\| 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK:Dihydroneop...	302.0	[0..1]	[274..1]
gi\|110682789, gi... - gi\|110802288\|ref\|YP_698421.1\| dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropte...	302.0	[0..1]	[273..1]
gi\|110798735, gi... - gi\|110798735\|ref\|YP_695723.1\| dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropte...	302.0	[0..1]	[273..1]
gi\|23336230, gi\|... - gi\|23336230\|ref\|ZP_00121455.1\| COG0801: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Bifidob...	301.0	[0..1]	[272..1]
gi\|23466233, gi\|... - gi\|23466233\|ref\|NP_696836.1\| SulD [Bifidobacterium longum NCC2705], gi\|23326978\|gb\|AAN25472.1\| SulD ...	298.0	[0..1]	[272..1]
gi\|88911852, gi\|... - gi\|88932216\|ref\|ZP_01137908.1\| 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK:Dihydroneop...	296.0	[0..3]	[270..20]
gi\|15896180, gi\|... - gi\|15896180\|ref\|NP_349529.1\| dihydroneopterin aldolase fused to 7,8-dihydro-6-hydroxymethylpterin-py... gi\|25288340 - pir\|\|B97260 dihydroneopterin aldolase fused to 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase ...	295.0	[0..1]	[274..1]
gi\|110590954, gi... - pir\|\|E97905 dihydroneopterin aldolase (EC 4.1.2.25) [imported] - Streptococcus pneumoniae (strain R6... SULD_STRR6 - Bifunctional folate synthesis protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sulD... gi\|116517074, gi... - gi\|116517074\|ref\|YP_815790.1\| bifunctional folate synthesis protein [Streptococcus pneumoniae D39], ...	290.0	[0..1]	[271..1]

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Predicted Domain #1

Region A:
Residues: [1-274]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKIYIRDLE FIGYHGLFEE EKKLGQKFFV SLELTTNLRE AGLNDDITKT THYGEVSETV  60
   61 KKIFFQKKYD LIETLAEDIA REVLLNYPLI SELKLEIKKP WAPVGIALKD VSVEITRKWN 120
  121 EVYISLGTNM GKKKKNMEKA IKEVANIKDT FIIKESTIIE TEPFGYKEQD DFLNSCIGVK 180
  181 TLLAPREILK ELLSIEKKMG RERKIKWGPR IIDLDIIFYG KEVIEEDDLV VPHPYMEYRE 240
  241 FVLKPLEEII PNFVHPLLSK RISTLRKELE NEKN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	78.522879
Match:	2cg8A
Description:	No description for 2cg8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits