YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|17988784, gi\|...
Organism:	Brucella melitensis bv. 1 str. 16M
Length:	159 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17988784, gi|....

Description	E-value	Query Range	Subject Range
gi\|134089961, gi... - gi\|50257184\|gb\|EAL19897.1\| hypothetical protein CNBG0400 [Cryptococcus neoformans var. neoformans B-...	103.0	[0..21]	[147..35]
gi\|57228337, gi\|... - gi\|58269890\|ref\|XP_572101.1\| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21], g...	102.0	[0..21]	[147..35]
gi\|38111495, gi\|... - gi\|39945832\|ref\|XP_362453.1\| hypothetical protein MG08036.4 [Magnaporthe grisea 70-15], gb\|EAA57067....	102.0	[0..21]	[158..35]
gi\|60468239 - gi\|60468239\|gb\|EAL66249.1\| hypothetical protein DDB0218390 [Dictyostelium discoideum] gi\|60468239, gi\|... - gi\|66811874\|ref\|XP_640116.1\| hypothetical protein [Dictyostelium discoideum AX4], gi\|60468239\|gb\|EAL...	101.0	[0..21]	[143..615]
gi\|40739493, gi\|... - gi\|67540258\|ref\|XP_663903.1\| hypothetical protein AN6299.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	99.0	[0..14]	[149..16]
gi\|85083018 - gi\|85083018\|ref\|XP_957026.1\| hypothetical protein [Neurospora crassa OR74A] gi\|28918110, gi\|... - gi\|40882162\|emb\|CAF05988.1\| conserved hypothetical protein [Neurospora crassa], gi\|32406394\|ref\|XP_3...	99.0	[0..13]	[150..26]
gi\|114188122, gi... - gi\|115442892\|ref\|XP_001218253.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	98.0	[0..9]	[147..6]
gi\|119193086, gi... - gi\|90305935\|gb\|EAS35566.1\| hypothetical protein CIMG_00920 [Coccidioides immitis RS], gi\|119193086\|r...	98.0	[0..23]	[150..33]
gi\|71000884, gi\|... - gi\|71000884\|ref\|XP_755123.1\| DUF803 domain membrane protein [Aspergillus fumigatus Af293], gi\|668527...	98.0	[0..6]	[147..20]
gi\|88180157, gi\|... - gi\|88180157\|gb\|EAQ87625.1\| hypothetical protein CHGG_04244 [Chaetomium globosum CBS 148.51], gi\|1161...	97.0	[0..9]	[147..24]

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Predicted Domain #1

Region A:
Residues: [1-159]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPSFSREDE RQAQSDQGKT MKYIPFILFT VMTNAAAQLM LKYGMITLGP ISFSADTLIQ  60
   61 RIFQIVFNPW VFAGLFTFVI SMASHLYVLS KVDLSFAYPF LSLAYVAVAL CAWLLFKEEL 120
  121 GAYKIAGIAF ICIGTILIAQ SGKVREADKA VTVQEQAQL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	11.0
Match:	2i68A
Description:	No description for 2i68A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits