YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|17982372, gi\|...
Organism:	Brucella melitensis bv. 1 str. 16M
Length:	207 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17982372, gi|....

Description	E-value	Query Range	Subject Range
gi\|225853032, gi... - gi\|225853032\|ref\|YP_002733265.1\| NUDIX hydrolase [Brucella melitensis ATCC 23457], gi\|225641397\|gb\|A... gi\|225627994, gi... - gi\|225627994\|ref\|ZP_03786030.1\| MutT/nudix family protein [Brucella ceti str. Cudo], gi\|225617157\|gb... gi\|62290438, gi\|... - gi\|62290438\|ref\|YP_222231.1\| MutT/nudix family protein [Brucella abortus bv. 1 str. 9-941], gi\|62196... gi\|254697884 - gi\|254697884\|ref\|ZP_05159712.1\| NUDIX hydrolase [Brucella abortus bv. 2 str. 86/8/59] gi\|254694229 - gi\|254694229\|ref\|ZP_05156057.1\| NUDIX hydrolase [Brucella abortus bv. 3 str. Tulya] gi\|254689740 - gi\|254689740\|ref\|ZP_05152994.1\| NUDIX hydrolase [Brucella abortus bv. 6 str. 870] gi\|237789244, gi... - gi\|237815946\|ref\|ZP_04594943.1\| MutT/nudix family protein [Brucella abortus str. 2308 A], gi\|2377892... gi\|254710591 - gi\|254710591\|ref\|ZP_05172402.1\| NUDIX hydrolase [Brucella pinnipedialis B2/94] gi\|254708221 - gi\|254708221\|ref\|ZP_05170049.1\| NUDIX hydrolase [Brucella pinnipedialis M163/99/10] gi\|254704807 - gi\|254704807\|ref\|ZP_05166635.1\| NUDIX hydrolase [Brucella suis bv. 3 str. 686] gi\|254702275 - gi\|254702275\|ref\|ZP_05164103.1\| NUDIX hydrolase [Brucella suis bv. 5 str. 513] gi\|254730775 - gi\|254730775\|ref\|ZP_05189353.1\| NUDIX hydrolase [Brucella abortus bv. 4 str. 292] gi\|189024668, gi... - gi\|189024668\|ref\|YP_001935436.1\| MutT/nudix family protein [Brucella abortus S19], gi\|189020240\|gb\|A... gi\|254717835 - gi\|254717835\|ref\|ZP_05179646.1\| NUDIX hydrolase [Brucella ceti M13/05/1] gi\|161619497, gi... - gi\|161619497\|ref\|YP_001593384.1\| NUDIX hydrolase [Brucella canis ATCC 23365], gi\|161336308\|gb\|ABX626... gi\|254714774 - gi\|254714774\|ref\|ZP_05176585.1\| NUDIX hydrolase [Brucella ceti M644/93/1]	175.0	[0..1]	[207..1]
gi\|25522240, gi\|... - pir\|\|AB2853 NTP pyrophosphohydrolase, MutT family [imported] - Agrobacterium tumefaciens (strain C58... gi\|17740724, gi\|... - gi\|17936134\|ref\|NP_532924.1\| NTP pyrophosphohydrolase, MutT family [Agrobacterium tumefaciens str. C...	161.0	[0..1]	[206..3]
gi\|14023181, gi\|... - gi\|14023181\|dbj\|BAB49788.1\| mll2727 [Mesorhizobium loti MAFF303099], gi\|13472435\|ref\|NP_104002.1\| hy...	157.0	[0..7]	[206..3]
gi\|45915852, gi\|... - gi\|69276884\|ref\|ZP_00612356.1\| NUDIX hydrolase [Mesorhizobium sp. BNC1], gi\|68191783\|gb\|EAN06438.1\| ...	157.0	[0..7]	[206..9]
gi\|86358652, gi\|... - gi\|86358652\|ref\|YP_470544.1\| MutT/NUDIX family NTP pyrophosphohydrolase [Rhizobium etli CFN 42], gi\|...	152.0	[0..5]	[206..10]
gi\|115257887, gi... - gi\|116253239\|ref\|YP_769077.1\| putative NUDIX/MutT family protein [Rhizobium leguminosarum bv. viciae...	150.0	[0..5]	[206..10]
gi\|23502418, gi\|... - gi\|23502418\|ref\|NP_698545.1\| MutT/nudix family protein [Brucella suis 1330], gi\|23348405\|gb\|AAN30460... gi\|82700361 - gi\|82700361\|ref\|YP_414935.1\| NUDIX hydrolase [Brucella melitensis biovar Abortus 2308] gi\|82616462 - gi\|82616462\|emb\|CAJ11527.1\| NUDIX hydrolase [Brucella melitensis biovar Abortus 2308] gi\|148559044, gi... - gi\|148559044\|ref\|YP_001259428.1\| MutT/nudix family protein [Brucella ovis ATCC 25840], gi\|148370301\|...	147.0	[0..40]	[207..1]
gi\|15075386 - gi\|15075386\|emb\|CAC46942.1\| Nudix hydrolase [Sinorhizobium meliloti 1021] gi\|15966116 - gi\|15966116\|ref\|NP_386469.1\| hypothetical protein SMc02701 [Sinorhizobium meliloti 1021]	143.0	[0..1]	[206..1]
gi\|114569278, gi... - gi\|114569278\|ref\|YP_755958.1\| NUDIX hydrolase [Maricaulis maris MCS10], gi\|114339740\|gb\|ABI65020.1\| ...	143.0	[0..34]	[206..37]
gi\|90418301, gi\|... - gi\|90418301\|ref\|ZP_01226213.1\| NTP phosphohydrolase (NUDIX hydrolase) [Aurantimonas sp. SI85-9A1], g... gi\|90418301, gi\|... - gi\|90418301\|ref\|ZP_01226213.1\| NTP phosphohydrolase (NUDIX hydrolase) [Aurantimonas sp. SI85-9A1], g...	142.0	[0..7]	[206..23]

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Predicted Domain #1

Region A:
Residues: [1-207]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFPAFSAG DFAERVRQWR PDHEELTGDH ALNPDVSQAM VTARMRDAAV LVPVVDRGAE  60
   61 ATLLLTRRTD TLRKHSGQIA FPGGAIDPED GTTERAALRE ANEEIGLAAD RAEIIGNLPR 120
  121 YLTGSGFSIT PVLAVVKTPF DVHPNPDEVA DIFEVPLSFL MNPANHRRES RLFNGKERFY 180
  181 YAMPYHERFI WGATAGIIRG LYERLYV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.221849
Match:	1nqyA
Description:	Coenzyme A pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.86119802438676	bayes_pls_golite062009
hydrolase activity	0.104572055301535	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: