YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|16804513
Organism:	Listeria monocytogenes EGD-e
Length:	576 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16804513.

Description	E-value	Query Range	Subject Range
gi\|254913374, gi... - gi\|254913374\|ref\|ZP_05263386.1\| hypothetical protein LmonJ2_11282 [Listeria monocytogenes J2818], gi... gi\|126942460, gi... - gi\|254900387\|ref\|ZP_05260311.1\| hypothetical protein LmonJ_11252 [Listeria monocytogenes J0161], gi\|... gi\|153180572, gi... - gi\|254937755\|ref\|ZP_05269452.1\| hypothetical protein LmonF6_11532 [Listeria monocytogenes F6900], gi... gi\|47096067, gi\|... - gi\|47096067\|ref\|ZP_00233668.1\| phosphoglucomutase/phosphomannomutase family protein [Listeria monocy...	535.0	[0..1]	[576..1]
gi\|133734458, gi... - gi\|254932284\|ref\|ZP_05265643.1\| phosphoglucomutase/phosphomannomutase family protein [Listeria monoc... gi\|46908647, gi\|... - gi\|46908647\|ref\|YP_015036.1\| phosphoglucomutase/phosphomannomutase family protein [Listeria monocyto... gi\|47559005 - gi\|47559005\|gb\|AAT35573.1\| phosphomannomutase [Listeria monocytogenes]	530.0	[0..1]	[576..1]
gi\|47018849, gi\|... - gi\|47092761\|ref\|ZP_00230546.1\| phosphoglucomutase/phosphomannomutase family protein [Listeria monocy... gi\|254825403 - gi\|254825403\|ref\|ZP_05230404.1\| phosphomannomutase and phosphoglucomutase [Listeria monocytogenes FS... gi\|226225023, gi... - gi\|226225023\|ref\|YP_002759130.1\| phosphomannomutase and phosphoglucomutase [Listeria monocytogenes C...	528.0	[0..1]	[576..1]
gi\|16801680 - gi\|16801680\|ref\|NP_471948.1\| hypothetical protein lin2618 [Listeria innocua Clip11262] gi\|16415155, gi\|... - pir\|\|AE1759 phosphomannomutase and phosphoglucomutase homolog lin2618 [imported] - Listeria innocua ...	525.0	[0..1]	[576..1]
gi\|42740035, gi\|... - gi\|42784104\|ref\|NP_981351.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus cereus A...	518.0	[0..1]	[574..1]
gi\|51974074, gi\|... - gi\|52140605\|ref\|YP_086224.1\| phosphomannomutase [Bacillus cereus E33L], gi\|51974074\|gb\|AAU15624.1\| p...	518.0	[0..1]	[574..1]
gi\|228653293, gi... - gi\|229130179\|ref\|ZP_04259139.1\| Phosphomannomutase [Bacillus cereus BDRD-Cer4], gi\|228653293\|gb\|EEL0... gi\|29898519, gi\|... - gi\|30022960\|ref\|NP_834591.1\| phosphoglucomutase [Bacillus cereus ATCC 14579], gi\|29898519\|gb\|AAP1179...	517.0	[0..1]	[574..1]
gi\|165870837, gi... - gi\|165870837\|ref\|ZP_02215489.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|167529673, gi... - gi\|167634923\|ref\|ZP_02393241.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|167512049, gi... - gi\|167639968\|ref\|ZP_02398236.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|170670375, gi... - gi\|170685911\|ref\|ZP_02877134.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|170706974, gi... - gi\|170706974\|ref\|ZP_02897431.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|177652277, gi... - gi\|177652277\|ref\|ZP_02934780.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|190561604, gi... - gi\|190567100\|ref\|ZP_03020015.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|254761403 - gi\|254761403\|ref\|ZP_05213424.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|196033047, gi... - gi\|196033047\|ref\|ZP_03100460.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus cereu... gi\|254753061 - gi\|254753061\|ref\|ZP_05205097.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|254740677 - gi\|254740677\|ref\|ZP_05198368.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|254735410 - gi\|254735410\|ref\|ZP_05193118.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|254687253 - gi\|254687253\|ref\|ZP_05151110.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthr... gi\|229601609, gi... - gi\|229601609\|ref\|YP_002869165.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anth... gi\|228596329, gi... - gi\|229187160\|ref\|ZP_04314306.1\| Phosphomannomutase [Bacillus cereus BGSC 6E1], gi\|228596329\|gb\|EEK54... gi\|229124462, gi... - gi\|229124462\|ref\|ZP_04253649.1\| Phosphomannomutase [Bacillus cereus 95/8201], gi\|228659010\|gb\|EEL146... gi\|229094019, gi... - gi\|229094019\|ref\|ZP_04225105.1\| Phosphomannomutase [Bacillus cereus Rock3-42], gi\|228689370\|gb\|EEL43... gi\|228829707, gi... - gi\|228929948\|ref\|ZP_04092960.1\| Phosphomannomutase [Bacillus thuringiensis serovar pondicheriensis B... gi\|228917549, gi... - gi\|228917549\|ref\|ZP_04081094.1\| Phosphomannomutase [Bacillus thuringiensis serovar pulsiensis BGSC 4... gi\|225790465, gi... - gi\|225866895\|ref\|YP_002752273.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus cere... gi\|47530458, gi\|... - gi\|47530458\|ref\|YP_021807.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthraci... gi\|196043853, gi... - gi\|196043853\|ref\|ZP_03111090.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus cereu... gi\|30259639, gi\|... - gi\|30264962\|ref\|NP_847339.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthraci... gi\|218906118, gi... - gi\|218906118\|ref\|YP_002453952.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus cere... gi\|21397401, gi\|... - gi\|65316911\|ref\|ZP_00389870.1\| COG1109: Phosphomannomutase [Bacillus anthracis str. A2012], ref\|NP_6... gi\|49331900, gi\|... - gi\|49480344\|ref\|YP_038942.1\| phosphomannomutase [Bacillus thuringiensis serovar konkukian str. 97-27... gi\|49181707, gi\|... - gi\|49187780\|ref\|YP_031033.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus anthraci...	516.0	[0..1]	[574..1]
gi\|47566955, gi\|... - gi\|47566955\|ref\|ZP_00237672.1\| phosphoglucomutase/phosphomannomutase family protein [Bacillus cereus...	516.0	[0..1]	[574..1]
gi\|89200233, gi\|... - gi\|89200233\|ref\|ZP_01178988.1\| Phosphoglucomutase/phosphomannomutase C terminal:Phosphoglucomutase/p...	515.0	[0..1]	[574..1]

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Predicted Domain #1

Region A:
Residues: [1-576]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWQEEYQKW VANDKLDSTL RKQLTNMETN EKELEDSFYR NMEFGTAGMR GVLGAGTNRM  60
   61 NIYTIRKASL GLAQFVAENG EEAKKRGIVI AYDPRHMSRE FAFESAAVLG HHGVKSYVFD 120
  121 ALRPTPELSF AVRHLNAFGG IVITASHNPP EYNGYKIYGE DGGQMPPTGA SAVIEYINAV 180
  181 EDIFSVEVAN QELLIENGLL EVISEKVDRP YLEKLKEVIV NKELVQERGE DLKIVFTPLH 240
  241 GTGGILGVPA LESVGFTNIV KVDEQFVNDP DFGTVKSPNP ENREAFLLAI EYGKKFGGDI 300
  301 LVGTDPDADR LGVAVRNADG EYEVLSGNQI GAIILHYLLK QKKAQSELPA NAAVLKSIVT 360
  361 SNLGTEIAKH YGAEMIEVLT GFKFIAEQIK HFEETGKHTF EFGYEESNGY MVKPFTRDKD 420
  421 AIQAVLAIAE VALVSKVAGR TLLEDLDQIY DEFGYYNEDL VSLTLSGKDG SERIKEITSS 480
  481 FREQLPTSMG GFVVERAEDY LRSETTWIAT GKTEAIHLPT ADVIKCYFED GSWFCLRPSG 540
  541 TEPKIKFYFS IRGESKEEST AKLEKVKADL MQHIEA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	91.69897
Match:	2fuvA
Description:	Phosphoglucomutase from Salmonella typhimurium.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits