YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|16410927, gi\|...
Organism:	Listeria monocytogenes
Length:	217 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16410927, gi|....

Description	E-value	Query Range	Subject Range
gi\|254824443 - gi\|254824443\|ref\|ZP_05229444.1\| O-methyltransferase [Listeria monocytogenes FSL J1-194] gi\|226224099, gi... - gi\|226224099\|ref\|YP_002758206.1\| O-methyltransferase [Listeria monocytogenes Clip81459], gi\|22587656... gi\|255521195 - gi\|255521195\|ref\|ZP_05388432.1\| O-methyltransferase [Listeria monocytogenes FSL J1-175] gi\|133735198, gi... - gi\|254931433\|ref\|ZP_05264792.1\| O-methyltransferase [Listeria monocytogenes HPB2262], gi\|153202423\|r... gi\|254993600 - gi\|254993600\|ref\|ZP_05275790.1\| O-methyltransferase [Listeria monocytogenes FSL J2-064] gi\|46880995, gi\|... - gi\|46907726\|ref\|YP_014115.1\| O-methyltransferase family protein [Listeria monocytogenes str. 4b F236... gi\|47093420, gi\|... - gi\|47093420\|ref\|ZP_00231185.1\| O-methyltransferase family protein [Listeria monocytogenes str. 4b H7...	169.0	[0..1]	[217..1]
gi\|47095452, gi\|... - gi\|47095452\|ref\|ZP_00233062.1\| O-methyltransferase family protein [Listeria monocytogenes str. 1/2a ... gi\|254912172 - gi\|254912172\|ref\|ZP_05262184.1\| hypothetical protein LmonJ2_05200 [Listeria monocytogenes J2818] gi\|254898336, gi... - gi\|254898336\|ref\|ZP_05258260.1\| hypothetical protein LmonJ_00935 [Listeria monocytogenes J0161], gi\|...	168.0	[0..1]	[217..1]
gi\|16414006, gi\|... - pir\|\|AD1624 O-methyltransferase homolog lin1533 [imported] - Listeria innocua (strain Clip11262), gi... gi\|16800601 - gi\|16800601\|ref\|NP_470869.1\| hypothetical protein lin1533 [Listeria innocua Clip11262]	166.0	[0..1]	[217..1]
gi\|25495989 - pir\|\|A97108 S-adenosylmethionine-dependent methyltransferase [imported] - Clostridium acetobutylicum gi\|15894963, gi\|... - gi\|15894963\|ref\|NP_348312.1\| S-adenosylmethionine-dependent methyltransferase [Clostridium acetobuty...	156.0	[0..1]	[213..5]
gi\|110803308, gi... - gi\|110803308\|ref\|YP_699057.1\| O-methyltransferase family protein [Clostridium perfringens SM101], gi...	151.0	[0..3]	[211..7]
gi\|18145435, gi\|... - gi\|18310754\|ref\|NP_562688.1\| O-methyltransferase family protein [Clostridium perfringens str. 13], g...	151.0	[0..3]	[211..7]
gi\|110798639, gi... - gi\|110798639\|ref\|YP_696458.1\| O-methyltransferase family protein [Clostridium perfringens ATCC 13124... gi\|170660821, gi... - gi\|170660821\|gb\|EDT13504.1\| O-methyltransferase family protein [Clostridium perfringens E str. JGS19... gi\|168211397, gi... - gi\|170710659\|gb\|EDT22841.1\| O-methyltransferase family protein [Clostridium perfringens B str. ATCC ... gi\|168214249, gi... - gi\|170714328\|gb\|EDT26510.1\| O-methyltransferase family protein [Clostridium perfringens CPE str. F49... gi\|182379734, gi... - gi\|182379734\|gb\|EDT77213.1\| O-methyltransferase family protein [Clostridium perfringens NCTC 8239], ... gi\|182625696, gi... - gi\|182625696\|ref\|ZP_02953465.1\| O-methyltransferase family protein [Clostridium perfringens D str. J...	151.0	[0..3]	[211..7]
gi\|28203202, gi\|... - gi\|28210764\|ref\|NP_781708.1\| caffeoyl-CoA O-methyltransferase [Clostridium tetani E88], gi\|28203202\|...	149.0	[0..2]	[211..6]
gi\|77640464, gi\|... - gi\|77683676\|ref\|ZP_00799121.1\| O-methyltransferase, family 3 [Alkaliphilus metalliredigenes QYMF], g...	149.0	[0..2]	[212..6]
gi\|89101198, gi\|... - gi\|89101198\|ref\|ZP_01174028.1\| YrrM [Bacillus sp. NRRL B-14911], gi\|89084084\|gb\|EAR63255.1\| YrrM [Ba...	146.0	[0..1]	[211..2]

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Predicted Domain #1

Region A:
Residues: [1-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDIIHDYLL KNIPKSSPFF KELEAYAKEN EVPIMEPDSL YCLLQILDIQ KPKRILELGT  60
   61 AIGYSALKMA DKLPDAEIIT VERDEERYEQ AIHNIQRYGA SDRVKVLLTD AIEGAEEILA 120
  121 HGPFDAIFID AAKAQYEKFF HIYTVSLAEN GVIYSDNVLF KGLALDMTPE KQRKLRVARK 180
  181 MRHFNDFLVT HPDFETTTIP LGDGLSISKR KKTGGVS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.69897
Match:	2gpyA
Description:	No description for 2gpyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits