YRC Public Data Repository - Protein Structure Prediction

Protein:	CCDS13334.1_1
Organism:	Chlorocebus aethiops
Length:	76 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCDS13334.1_1.

Description	E-value	Query Range	Subject Range
IPKG_PIG - cAMP-dependent protein kinase inhibitor gamma OS=Sus scrofa GN=PKIG PE=3 SV=1	112.0	[0..1]	[76..1]
gi\|73992487 - gi\|73992487\|ref\|XP_853601.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma [Ca...	110.0	[0..1]	[76..1]
gi\|90076928 - gi\|90076928\|dbj\|BAE88144.1\| unnamed protein product [Macaca fascicularis] gi\|109091867, gi... - gi\|109091873\|ref\|XP_001110061.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma...	110.0	[0..1]	[76..1]
IPKG_MOUSE - cAMP-dependent protein kinase inhibitor gamma OS=Mus musculus GN=Pkig PE=1 SV=1 gi\|23306796, gi\|... - gi\|56789440\|gb\|AAH88108.1\| Protein kinase inhibitor, gamma [Rattus norvegicus], gi\|23618889\|ref\|NP_7...	106.0	[0..1]	[76..1]
gi\|111307175 - gi\|111307175\|gb\|AAI20317.1\| PKIG protein [Bos taurus]	105.0	[0..1]	[76..1]
gi\|56208533 - gi\|56208533\|emb\|CAI19688.1\| protein kinase (cAMP-dependent, catalytic) inhibitor gamma [Homo sapiens...	97.0	[0..1]	[51..1]
gi\|109479223, gi... - gi\|109479223\|ref\|XP_001075390.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma...	88.0	[0..1]	[67..1]

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Predicted Domain #1

Region A:
Residues: [1-76]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEVESSYSD FISCDRTGRR NAVPDIQGDS EAVSVRKLAG DMGELALEGA EGQVEGSAPD  60
   61 KEAGNQPQSS DGTTSS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	47.376751
Match:	PF02827.7
Description:	No description for PF02827.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits