| Protein: | acr-15 |
| Organism: | Caenorhabditis elegans |
| Length: | 479 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-15.
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..2] | [475..14] |
|
Region A: Residues: [1-384] |
1 11 21 31 41 51
| | | | | |
1 MLLPILLHFL LLITQLNGSP AEVRLINDLM SGYVREERPT LDSSKPVVVS LGVFLQQIIN 60
61 LSEKEEQLEV NAWLKFQWRD ENLRWEPTAY ENVTDLRHPP DALWTPDILL YNSVDSEFDS 120
121 SYKVNLVNYH TGNINWMPPG IFKVSCKLDI YWFPFDEQVC YFKFGSWTYT RDKIQLEKGD 180
181 FDFSEFIPNG EWIIIDYRTN ITVKQYECCP EQYEDITFTL HLRRRTLYYS FNLIAPVLLT 240
241 MILVILGFTV SPETCEKVGL QISVSLAICI FLTIMSELTP QTSEAVPLLG VFFHTCNFIS 300
301 VLATSFTVYV QSFHFRNQHV HERMDFWMRF ILLEWSPWLL RMKMPDRENN FQTLTESWKG 360
361 RNRRESMART AFEYADGPVT QIHS
|
| Detection Method: |  |
| Confidence: | 70.221849 |
| Match: | 2bg9C |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [385-479] |
1 11 21 31 41 51
| | | | | |
1 MGIMLKDNFE ELIYQVKQEK IADEKGIERL RVLQKIYDHV KMIREHDDDN DEDSRVALEW 60
61 RFAAIVVDRL CLLAFSLLIV VVSIIIALRA PYLFA
|
| Detection Method: | |
| Confidence: | 43.522879 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
