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View Structure Prediction Details

Protein: gi|53982302
Organism: Oryza sativa Japonica Group
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53982302.

Description E-value Query
Range
Subject
Range
gi|29367569 - gi|29367569|gb|AAO72646.1| putative receptor protein kinase [Oryza sativa (japonica cultivar-group)]
381.0 [0..80] [457..3]

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Predicted Domain #1
Region A:
Residues: [1-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEDAYGGS YQQSWQQNAP PPPPEHVVKM HPSPPPAYAN RPPQPPSTPP AAMINSSGGS  60
   61 GSYSGGEILP PPSPGAALGF SKSTFTYEEL LRATDGFSDA NLLGQGGFGY VHRGVLPTGK 120
  121 EIAVKQLKVG SGQGEREFQA EVEIISRVHH KHLVSLVGYC ISGGKRLLVY EFVPNNTLEF 180
  181 HLHGKGRPTM EWPTRLKIAL GAAKGLAYLH EDCHPKIIHR DIKASNILLD FKFESKVADF 240
  241 GLAKFTSDNN THVSTRVMGT FGYLAPEYAS SGKLTEKSDV FSYGVMLLEL ITGRRPVDTS 300
  301 QTYMDDSLVD WARPLLMQAL ENGNYEELVD PRLGKDFNPN EMARMIACAA ACVRHSARRR 360
  361 PRMSQVVRAL EGDVSLEDLN E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.30103
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #2
Region A:
Residues: [382-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVRPGHSRYF GSYSSSDYDS GQYNEDMKKF RKMAFTNNND TSSQYSAPTS EYGQIPSASS  60
   61 SEGQQTQEVE SRTTKRGGYS GYSSGYSGAS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle