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View Structure Prediction Details

Protein: gi|881619, gi|15...
Organism: Homo sapiens
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|881619, gi|15....

Description E-value Query
Range		 Subject
Range
gi|33303939 - gi|33303939|gb|AAQ02477.1| casein kinase 1, delta [synthetic construct]
 338.0 [0..1] [415..1]
KC1D_MOUSE - Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2
gi|117616262 - gi|117616262|gb|ABK42149.1| casein kinase I delta [synthetic construct]
KC1D_RAT - Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2
 338.0 [0..1] [415..1]
CSNK1D - casein kinase 1, delta
gi|114671108 - gi|114671108|ref|XP_001167815.1| PREDICTED: casein kinase 1, delta isoform 3 [Pan troglodytes]
ENSCJAT00000035175 - null
KC1D_BOVIN - Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2
 338.0 [0..1] [415..1]
gi|50757757 - gi|50757757|ref|XP_415634.1| PREDICTED: similar to Casein kinase 1, delta, isoform 1 [Gallus gallus]
 336.0 [0..1] [415..1]
KC1D_PONAB - Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1
gi|55727769 - gi|55727769|emb|CAH90635.1| hypothetical protein [Pongo abelii]
 336.0 [0..1] [415..1]
KC1D_XENTR - Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1
 332.0 [0..1] [415..1]
gi|148229581, gi... - gi|60499545|gb|AAX22003.1| casein kinase I delta [Xenopus laevis], gi|148229581|ref|NP_001080669.1| ...
 332.0 [0..1] [415..1]
gi|114671110 - gi|114671110|ref|XP_511761.2| PREDICTED: casein kinase 1, delta isoform 4 [Pan troglodytes]
 323.0 [0..1] [400..1]
gi|76645405 - gi|76645405|ref|XP_601842.2| PREDICTED: similar to Casein kinase I, delta isoform (CKI-delta) isofor...
 319.0 [0..1] [400..1]

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Predicted Domain #1
Region A:
Residues: [1-321] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRVGNRYR LGRKIGSGSF GDIYLGTDIA AGEEVAIKLE CVKTKHPQLH IESKIYKMMQ  60
   61 GGVGIPTIRW CGAEGDYNVM VMELLGPSLE DLFNFCSRKF SLKTVLLLAD QMISRIEYIH 120
  121 SKNFIHRDVK PDNFLMGLGK KGNLVYIIDF GLAKKYRDAR THQHIPYREN KNLTGTARYA 180
  181 SINTHLGIEQ SRRDDLESLG YVLMYFNLGS LPWQGLKAAT KRQKYERISE KKMSTPIEVL 240
  241 CKGYPSEFAT YLNFCRSLRF DDKPDYSYLR QLFRNLFHRQ GFSYDYVFDW NMLKFGASRA 300
  301 ADDAERERRD REERLRHSRN P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.045757
Match: 1ckiA
Description: Casein kinase-1, CK1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [322-415] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATRGLPSTDS GRLRGTQEVA PPTPLTPTSH TANTSPRPVS GMERERKVSM RLHRGAPVNI  60
   61 SSSDLTGRQD TSRMSTSQIP GRVASSGLQS VVHR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle