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View Structure Prediction Details

Protein: gi|215678836, gi...
Organism: Oryza sativa Japonica Group
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215678836, gi....

Description E-value Query
Range
Subject
Range
PLS2_BOVIN - Phospholipid scramblase 2 OS=Bos taurus GN=PLSCR2 PE=2 SV=1
320.0 [0..36] [326..17]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWLPRLLSH AAAAGRATAR TTGSHARGSN GFASGRGGSD GAVVPREWLR KLWTEELRRQ  60
   61 RDAARRWGRR AVATTDGGGA DSFSDFARAP SRSYQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDDRDLTPVE AKLKPLLSRA NLLIARDIEW ANIVLAFEQE SRYIIMDPLF PQSPVGFIRE  60
   61 KSNVIFRQLF RSRRPFVAEI TDAMGNEIFT VRRPFWLINS SIYAEVNGKE VGVVHRRWHL 120
  121 WRRIYDLYLG NRQFAVVENP GFWNWTFTLT DEDDNVLAQI DRNWRGIGFE LFTDAGQYAI 180
  181 RFGDAGLNRK FGLASDIDEL HVVRQLSLPE RAVALALAVS LDCDYFSKRG GWGLPFLIAT 240
  241 E

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.75
Match: 1zxuA
Description: X-ray structure of protein from arabidopsis thaliana AT5G01750
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle