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View Structure Prediction Details

Protein: gi|48374958, gi|...
Organism: Sorghum bicolor
Length: 585 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|48374958, gi|....

Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSASQVQE ELQQAAERQL MRNQLAAAAR SINWTYALFW SISSTRPGVL TWTDGFYNGE  60
   61 VKTRKISNSV ELTADQLVMQ RSEQLRELYE ALLSGECDRR AARPVGSLSP EDLGDTEWYY 120
  121 VVCMTYAFQP GQGLPGRSFG GNEHVWLRNA HLADSKAFPR AVLAKSIICI PLMGGVLELG 180
  181 TTDTVPEDPD LISRATAAFW EPQCPTYSEE PTSNPSANEA GE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [223-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AADIVVFEDQ LGHSAMKTTT AAGNEPVSLF NASLDHITDE IDDFYSLLEE MVVRPLPLED  60
   61 SLIMVDGSNN FEVPSSPEPP SPGATTNNNG ADTSSSPADG SRATSFMAWT RSSQSCSDEA 120
  121 VAAVPVIEEP QKLLKKVV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [361-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGGEAWANCG GGGTAGTAQE SGIKNHVMSE RKRREKINEM FLILKSLVPS IHKAMKIHVD  60
   61 KASILTETIA YLKELQRRVQ ELESSRELTT PSETTTRTTR PRGISNESAR KKLCAGSKRE 120
  121 SPALEVDGDV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.0
Match: 1nkpA
Description: Myc prot-oncogene protein
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [491-585]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNKEHPWVLP KDGTSNVTVT VANTDVLLEV QCRWEELLMT RVFDAIKSLH LDVLSVQAST  60
   61 PDGFMGLKIR AQFAGSGAVV PWMISEALHK AIGKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle