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View Structure Prediction Details

Protein: gi|241941352, gi...
Organism: Sorghum bicolor
Length: 658 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|241941352, gi....

Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLKLGSRA DVFRKQGQEW YCTSGLPSDI TVVVGEQSFH LHKFPLLSKS GLLEKRIREK  60
   61 IDKGDDSCTI DLSDIPGGAK AFELAAKFCY GVKFEMTASN VVHLRCAADY LEMTEEISEE 120
  121 NLIAQTEYFL TQTVLRSWKD SVKALQTCDN VLEVAERLQI VKRCVDSIAT RSCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.39794
Match: 2ihcA
Description: No description for 2ihcA was found.

Predicted Domain #2
Region A:
Residues: [175-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPDLFGWPVA QYGGPMQSPG GSLLWNGIST GARPRNSSPD WWYDDVSCLS LPLYKKLISA  60
   61 MEYRGISQEI IVGSLNHYAK RRLPGLNRRK SIGDVSNC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [273-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSMTSLTSIP SEDDQKYLLE EIDRLLPFQR GVTSCKLLFG LLRTAIFLKA SPSCVSNLER  60
   61 RIGMQLDKAS LEDLLIPNVS DSVETLYDVD CAQRILDHFL AMDQETGGAS PGIGEDGQML 120
  121 ASPSLMPIMM VAKLIDGYLA EVAPDMNLKL PKFRSLAAAI PDYAR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [438-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIDDGLYRAI DIYLKAHPHL SESEKEELCR VMDCQKLSLE ACTHAAQNER LPLRIIVQVL  60
   61 FFEQLQLRSS IAECLMISEP LDGGGGVGPS RQLGGLPVSG EHHRGAGWPL AARENQTLRE 120
  121 GMDSMKQRVA ELEKECSAMR EDIERL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [584-658]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRSRSASKSR FPFALTAKPV CSTKDKEAAP ESSKSKAKAA ATGSEDKLAV VKGGAATDGA  60
   61 AQPKHRKHKM NLSAC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle