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View Structure Prediction Details

Protein: AHL25_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHL25_ARATH.

Description E-value Query
Range
Subject
Range
gi|110289622, gi... - gi|37537056|ref|NP_922830.1| putative AT-Hook DNA-binding protein [Oryza sativa (japonica cultivar-g...
gi|125533038 - gi|125533038|gb|EAY79603.1| hypothetical protein OsI_34743 [Oryza sativa Indica Group]
215.0 [0..8] [293..103]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYMHPLLG QELHLQRPED SRTPPDQNNM ELNRSEADEA KAETTPTGGA TSSATASGSS  60
   61 SGRRPRGRPA GSKNKPKPPT IITRDSPNV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRSHVLEVTS GSDISEAVST YATRRGCGVC IISGTGAVTN VTIRQPAAPA GGGVITLHGR  60
   61 FDILSLTGTA LPPPAPPGAG GLTVYLAGGQ GQVVGGNVAG SLIASGPVVL MAASFANAVY 120
  121 DRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.154902
Match: 2dt4A
Description: No description for 2dt4A was found.

Predicted Domain #3
Region A:
Residues: [213-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIEEEETPPP RTTGVQQQQP EASQSSEVTG SGAQACESNL QGGNGGGGVA FYNLGMNMNN  60
   61 FQFSGGDIYG MSGGSGGGGG GATRPAF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle