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View Structure Prediction Details

Protein: GPAT8_ARATH
Organism: Arabidopsis thaliana
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPAT8_ARATH.

Description E-value Query
Range
Subject
Range
GPAT4_ARATH - Glycerol-3-phosphate 2-O-acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1
396.0 [0..1] [499..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPEKKSQNF PPITECRDGE YDSIAADLDG TLLLSRSSFP YFMLVAVEAG SLLRGLILLL  60
   61 SLPFVIISYL FVSESLGIQI LIFISFAGLK IRDIELVSRA VLPRFYAADV RKDSFEVFDK 120
  121 CKRKVVVTAN PIVMVEAFVK DYLGGDKVLG TEIEVNPKTN RATGFVKKPG VLVGDLKRLA 180
  181 ILKEFGNESP DLGLGDRTSD HDFMSLCKKG YMVHATKSAT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.045757
Match: 1f5sA
Description: Phosphoserine phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [221-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIPKERLKNR IVFHDGRLAQ RPTPLNAIIT YLWLPFGFIL SIIRVYFNLP LPERFVRYTY  60
   61 EMLGIHLTIR GHRPPPPSPG TLGNLYVLNH RTALDPIIVA IALGRKICCV TYSVSRLSLM 120
  121 LSPIPAVALT RDRATDAANM RKLLEKGDLV ICPEGTTCRE EYLLRFSALF AELSDRIVPV 180
  181 AMNCKQGMFN GTTVRGVKFW DPYFFFMNPR PSYEATFLDR LPEEMTVNGG GKTPIEVANY 240
  241 VQKVIGAVLG FECTELTRKD KYLLLGGNDG KVESINNTKK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.5
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle