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View Structure Prediction Details

Protein: WSD1_ARATH
Organism: Arabidopsis thaliana
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WSD1_ARATH.

Description E-value Query
Range
Subject
Range
gi|75907835, gi|... - gi|75907835|ref|YP_322131.1| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi|757...
375.0 [0..3] [477..1158]

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Predicted Domain #1
Region A:
Residues: [1-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAEKVMERE IETTPIEPLS PMSHMLSSPN FFIVITFGFK TRCNRSAFVD GINNTLINAP  60
   61 RFSSKMEINY KKKGEPVWIP VKLRVDDHII VPDLEYSNIQ NPDQFVEDYT SNIANIPMDM 120
  121 SKPLWEFHLL NMKTSKAESL AIVKIHHSIG DGMSLMSLLL ACSRKISDPD ALVSNTTATK 180
  181 KPADSMAWWL FVGFWFMIRV TFTTIVEFSK LMLTVCFLED TKNPLMGNPS DGFQSWKVVH 240
  241 RIISFEDVKL IKDTMNMKVN DVLLGMTQAG LSRYLSSKYD GSTAEKKKIL EKLRVRGAVA 300
  301 INLRPATKIE DLADMMAKGS KCRWGNFIGT VIFPLWVKSE KDPLEYIRRA KATMDRKKIS 360
  361 LEAFFFYGII KFTLKFFGGK AVEAFGKRIF GHTSLAFSNV KGPDEEISFF HHPISYIAGS 420
  421 ALVGAQALNI HFISYVDKIV INLAVDTTTI QDPNRLCDDM VEALEIIKSA TQGEIFHKTE 480
  481 V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1l5aA
Description: VibH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.985567717478902 bayes_pls_golite062009
transferase activity 0.65532722795675 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.590907147191141 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.589573845516701 bayes_pls_golite062009
acyltransferase activity 0.58932324215015 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle