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View Structure Prediction Details

Protein: CE37569
Organism: Caenorhabditis elegans
Length: 514 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37569.

Description E-value Query
Range
Subject
Range
CE37427 - status:Confirmed UniProt:Q65XX9 protein_id:AAU20834.1
342.0 [0..9] [514..109]

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Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVIGGDQAL DSPSGSTSRA GSSVSATASP MHRNTTSQHG GLFVSAPGKI ILFGEHAVVY  60
   61 GRTAIAGSID LRTYVSLYTS ADGRIYLSLP DLGVEKTWML KDLLKAADRL AAEYPIEEDQ 120
  121 PPSLEILVPI ARKLSGSCED QCGVQHLAIL AFWYLLLGVA HRKRDLLAVK ATVRFKLPSC 180
  181 VGLGSSGAYC VCIATSLLQT AGLIPPPSIV ADEQGNLTWE EDHLDIIRKW ATAAESLIHG 240
  241 RASGLDAAVC TFGGVASFKP GHRIEHLKNL PDLRVILVNS KVERNTARMV QTVKERLKKF 300
  301 PEVVDAMFGS IDAISLDAAK ILHRPLLEEN GGGDTGSTVQ ENGLGPFGGN MVEQDHHSLQ 360
  361 PTRTASVRSS SLSSYVGGGK RNSSASVISA TSEKGENVDT FSKLNDLCRI NNQLLIALGV 420
  421 G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.522879
Match: 1kvkA
Description: Mevalonate kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.306083871041672 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [422-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPKVDLICTT LARYGIHPKM TGAGGGGSVF AFLKPNTPQT LLDMIDGELR SHGFEVWQPP  60
   61 LGGPGVVEHQ TRPELFQTPV SSTQCSTPAS KHK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.94
Match: 1kvkA
Description: Mevalonate kinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle