YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE37575
Organism: Caenorhabditis elegans
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37575.

Description E-value Query
Range
Subject
Range
gi|114619267 - gi|114619267|ref|XP_531112.2| PREDICTED: solute carrier family 39 (zinc transporter), member 14 [Pan...
272.0 [0..37] [462..386]

Back

Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSKKKTNK KLKNSGKNCF FFQFSAKYLE FSVNFPRKNS KKKLETIIFY EKNVEKTLFF  60
   61 TKQYFKFFNE KFQFFSNLSN KKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNTGKKPVFF SNFSNKSIFF AVWGVGLLFV TLINMCAVVG IGVMRYLTKN TYNQIITLFV  60
   61 GLGVGSLSGS SFYHLLPQAH PSLMDEVDEN GVPTHSYLHM AHISILGVYA FFFCDKLIKI 120
  121 ILEIRKKNQH IHHRRLSIEN PGMTTERSDS TFVTDAGDRE EELLRSVLKK GVMSKADIDE 180
  181 TEMMTLEDKS GKSMG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [279-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQAHGICVHD HSIEFRAGDS AIAAVAWMIV FGDGLHNFID GISIGAAFAE SLHSGLSISL  60
   61 AVLCEEFPHE LGDVAILVAS GMTLKQALIY NLLSAITCYV GFFIGVGIGE LGPDTSKYAF 120
  121 GLAGGMFLYI SLACMMPEMK KAMEEALNVS LRHGIYVLFL QSVGLFSGLT LMYIMARYGE 180
  181 SISI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle