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View Structure Prediction Details

Protein: PMA1_ARATH
Organism: Arabidopsis thaliana
Length: 949 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for PMA1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-884]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK  60
   61 FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII CLLVINSTIS FIEENNAGNA 120
  121 AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA 180
  181 LTGESLPVTK HPGQEVFSGS TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL 240
  241 TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG 300
  301 SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL 360
  361 FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF NPVDKRTALT YIDSDGNWHR 420
  421 VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV 480
  481 GLLPLFDPPR HDSAETIRRA LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT 540
  541 DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD 600
  601 IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF 660
  661 MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT PDSWKLKEIF ATGIVLGGYQ 720
  721 AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV 780
  781 ERPGALLMIA FVIAQLVATL IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA 840
  841 IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 3b8cA
Description: No description for 3b8cA was found.

Predicted Domain #2
Region A:
Residues: [885-949]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQPKEDVNIF PEKGSYRELS EIAEQAKRRA EIARLRELHT LKGHVESVAK LKGLDIDTAG  60
   61 HHYTV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 2o98P
Description: No description for 2o98P was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle