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View Structure Prediction Details

Protein: gi|15222229, gi|...
Organism: Arabidopsis thaliana
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222229, gi|....

Description E-value Query
Range
Subject
Range
Y1607_METJA, YG0... - (Q59002) Hypothetical glycosyl transferase MJ1607 (EC 2.-.-.-), Uncharacterized glycosyltransferase ...
Y1607_METJA - Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM...
271.0 [0..67] [455..1]

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Predicted Domain #1
Region A:
Residues: [1-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKASTMQRK RWALMVLLFL SVSTVCMILV RSSFETCSIS SQFVEEKNGE SSAAKFQSNP  60
   61 LDFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVGADVV WITNQKPLED DEVVYSLEHK 120
  121 MLDRGVQVIS AKGQKAVDTS LKADLIVLNT AVAGKWLDAV LKENVVKVLP KILWWIHEMR 180
  181 GHYFNADLVK HLPFVAGAMI DSHATAGYWK NRTQARLGIK MPKTYVVHLG NSKELMEVAE 240
  241 DSVAKRVLRE HVRESLGVRN EDLLFGIINS VSRGKGQDLF LRAFHESLER IKEKKLQVPT 300
  301 MHAVVVGSDM SKQTKFETEL RNFVREKKLE NFVHFVNKTL TVAPYIAAID VLVQNSQARG 360
  361 ECFGRITIEA MAFKLPVLGT AAGGTMEIVV NGTTGLLHSA GKEGVIPLAK NIVKLATQVE 420
  421 LRLRMGKNGY ERVKEMFLEH HMSHRIASVL KEVLQHAKAR ALR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 1rzuA
Description: Crystal structure of the glycogen synthase from A. tumefaciens in complex with ADP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.12142599404571 bayes_pls_golite062009
transferase activity 1.04894606863363 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.929172049566779 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.18186445930239 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle