| Protein: | gi|42566124, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 649 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42566124, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
697.0 | [0..1] | [649..1] |
|
|
481.0 | [0..39] | [627..29] |
|
|
368.0 | [0..109] | [631..74] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MAFNTAMAST SPAAANDVLR EHIGLRRSLS GQDLVLKGGG IRRSSSDNHL CCRSGNNNNR 60
61 ILAVSVRPGM KTSRSVGVFS FQISSSIIPS PIKTLLFETD TSQDEQESDE IEIETEPNLD 120
121 GAKKANWVER LLEIRRQWKR EQKTESGNSD VAEESVDVTC GCEEEEGCIA NYGSVNGDWG 180
181 RESFSRLLVK V
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-256] |
1 11 21 31 41 51
| | | | | |
1 SWSEAKKLSQ LAYLCNLAYT IPEIKGEDLR RNYGLKFVTS SLEKKAKAAI LREKLEQDPT 60
61 HVPVI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.865 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [257-649] |
1 11 21 31 41 51
| | | | | |
1 TSPDLESEKQ SQRSASSSAS AYKIAASAAS YIHSCKEYDL SEPIYKSAAA AQAAASTMTA 60
61 VVAAGEEEKL EAARELQSLQ SSPCEWFVCD DPNTYTRCFV IQGSDSLASW KANLFFEPTK 120
121 FEDTDVLVHR GIYEAAKGIY EQFLPEITEH LSRHGDRAKF QFTGHSLGGS LSLIVNLMLI 180
181 SRGLVSSEAM KSVVTFGSPF VFCGGEKILA ELGLDESHVH CVMMHRDIVP RAFSCNYPDH 240
241 VALVLKRLNG SFRTHPCLNK NKLLYSPMGK VYILQPSESV SPTHPWLPPG NALYILENSN 300
301 EGYSPTALRA FLNRPHPLET LSQRAAYGSE GSVLRDHDSK NYVKAVNGVL RQHTKLIVRK 360
361 ARIQRRSVWP VLTSAGRGLN ESLTTAEEIM TRV
|
| Detection Method: | |
| Confidence: | 47.69897 |
| Match: | 1dt3A |
| Description: | Triacylglycerol lipase |
Matching Structure (courtesy of the PDB): |
|
