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View Structure Prediction Details

Protein: BUP1_ARATH
Organism: Arabidopsis thaliana
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|92896179 - gi|92896179|gb|ABE93097.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Medicag...
349.0 [0..6] [406..4]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES  60
   61 AKALSSKHDF DLQAASFSAD KEQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNPRVVRVG LIQNSIALPT TAPFSDQTRG IFDKLKPIID AAGVAGVNIL CLQEAWTMPF  60
   61 AFCTRERRWC EFAEPVDGES TKFLQELAKK YNMVIVSPIL ERDIDHGEVL WNTAVIIGNN 120
  121 GNIIGKHRKN HIPRVGDFNE STYYMEGDTG HPVFETVFGK IAVNICYGRH HPLNWLAFGL 180
  181 NGAEIVFNPS ATVGELSEPM WPIEARNAAI ANSYFVGSIN RVGTEVFPNP FTSGDGKPQH 240
  241 NDFGHFYGSS HFSAPDASCT PSLSRYKDGL LISDMDLNLC RQYKDKWGFR MTARYEVYAD 300
  301 LLAKYIKPDF KPQVVSDPLL HKNST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.221849
Match: 1f89A
Description: hypothetical protein yl85
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
beta-ureidopropionase activity 2.85740685481813 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 2.08563993959019 bayes_pls_golite062009
hydrolase activity 1.99914043564785 bayes_pls_golite062009
catalytic activity 1.64442398754697 bayes_pls_golite062009
N-carbamoylputrescine amidase activity 0.749539597459006 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle