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View Structure Prediction Details

Protein: gi|30725620, gi|...
Organism: Arabidopsis thaliana
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30725620, gi|....

Description E-value Query
Range
Subject
Range
gi|25406950, gi|... - gi|8954043|gb|AAF82217.1|AC067971_25 Strong similarity to a mitochondrial carrier protein from Ribes...
260.0 [0..6] [375..32]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLLENHQF ATHAIAASAS VSLGTALAYP LDTIKTIIQV GSGPNKKLSS FQVFNRVLRF  60
   61 SGYSGLYSGL GSLTLGRISG FGARFGVYEI LTAFYKDGRH DNYVSVGEAF LAGLVGGAAE 120
  121 TVMTSPFELI KVRKQVTAAS RAPNASAVAE TAPVSPMITK LLRRYTLDVK SLTQTVSLLS 180
  181 VLNHKHPNMT AALQEYPWMM TGTGNPPSAM DVKRPLDVAS LEGYRALWRN LRSGLIRDCI 240
  241 YGGVFFSTWQ FLHEAMVGWK AVGMNPLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [269-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSEEEVGPLS PVAISLAAGI SGAVAAAASH SFDTARTRAQ CVILPKYTAK ERKFLKWNKP  60
   61 GKRLERWTGI HPTDRNLLFR GIGMRMARSS VASTVIVGSY YLAVDLLVPK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.22
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle