| Protein: | gi|15223823, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 666 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15223823, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..239] | [664..35] |
|
Region A: Residues: [1-440] |
1 11 21 31 41 51
| | | | | |
1 MPTTTTSSAS SSSSASGNNR QSDVFSRLAS SDPEVKLKAL REVKNQIIGN RTKKLSFLKL 60
61 GAIPAIASVL ADADDSDECN NILVQSAAAL GSFACGFEAG VQAVLDAGVF PHLLRLLTNT 120
121 DEKVVDAGAR SLRMIFQSNQ APKYDFLQEK NMEFLFSLLN SENENVSGLG ASIIAHACGT 180
181 SVEQRVLCEA GVLEKLVILL DGSLSQREAC LESLATVLKN NPEAVSDFVG LESGKYFNSV 240
241 TELTKDRYPR TRLLSCLCLV VIYNTSPSYF INMGTKSSLI TTLLELLNDP GQSGDDAALG 300
301 LSCLIAEKED LQQLAYEADA IKNIVEILKT GSELQSKRLQ GLFLSLAELC SKLEDCRCSF 360
361 LSLQVLDLLT DALRHKDADV RAAACICFRN AARSVKSLSA GRFNSDHVML PLVQLLHDPS 420
421 SSVQVAVLGA LNNIVMDFSS
|
| Detection Method: |  |
| Confidence: | 57.69897 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.786930091838216 | bayes_pls_golite062009 |
| protein binding | 0.273418027792729 | bayes_pls_golite062009 |
|
Region A: Residues: [441-598] |
1 11 21 31 41 51
| | | | | |
1 PKSSFIEYGG IKQLTELSKS MDPNTRCSAL RALRNLMFLA DIKRKELFYS DVKAQGLACL 60
61 ISDPEPPVQE QALALLRNLV DGCISSIEFV FDEDGLILDT VGRQLRKAPQ AQMAIQGMYV 120
121 LTNVASGTEL HKEAVMEQLF PQAKAGSENF MLKFLQSD
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 2bkuB |
| Description: | Kap95p:RanGTP complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [599-666] |
1 11 21 31 41 51
| | | | | |
1 ESQLRSAAVW TIINLISPSS PGAFDRHVKL RNAGIIPQLK NMVNDACLDV KIRIRTVLGQ 60
61 SMSFGDNY
|
| Detection Method: | |
| Confidence: | 75.0 |
| Match: | 1ialA |
| Description: | Importin alpha |
Matching Structure (courtesy of the PDB): |
|
