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View Structure Prediction Details

Protein: ACOX3_ARATH
Organism: Arabidopsis thaliana
Length: 675 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACOX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|26333821, gi|... - gi|66793429|ref|NP_056544.2| acyl-Coenzyme A oxidase 1 [Mus musculus], gi|33989581|gb|AAH56448.1| Ac...
485.0 [0..35] [675..1]

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Predicted Domain #1
Region A:
Residues: [1-675]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH  60
   61 NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ REITMKRIWY LLENGVFKGW 120
  121 LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY 180
  181 VVKGCFAMTE LGHGSNVRGI ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF 240
  241 SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN 300
  301 LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS 360
  361 RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN ELKMIYVKRT PETNKAIHVV 420
  421 SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK 480
  481 ALFAEYVSCK KRNKPFKGLG LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ 540
  541 FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL 600
  601 VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS 660
  661 PIAFNWVEAN AWSSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 137.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle