YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MTPC2_ARATH
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTPC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|12322010 - gi|12322010|gb|AAG51048.1|AC069473_10 unknown protein; 24862-27391 [Arabidopsis thaliana]
281.0 [0..1] [393..1]
gi|76646233 - gi|76646233|ref|XP_878682.1| PREDICTED: similar to zinc transporter ZTL1 isoform 1 isoform 3 [Bos ta...
255.0 [0..52] [391..360]
gi|7243708, gi|1... - gi|7243708|gb|AAF43422.1|AF233321_1 zinc transporter like 1 [Mus musculus], ref|NP_075023.1| solute ...
252.0 [0..52] [391..87]
gi|73949652 - gi|73949652|ref|XP_850350.1| PREDICTED: similar to zinc transporter ZTL1 isoform 1 isoform 2 [Canis ...
251.0 [0..52] [391..359]

Back

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSISFNPR GDNELPDDRS SDVGYAANDR RLAYSRSFQQ SHGPRTPAVT EAAKPFLDRT  60
   61 VSSIDMPPDI YSVDGSDVFF GEGKDVDMAK V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVLEMVWEVF GVVTSGNRQM KRLFLLIALN VLYSTTELSI GIFTGRVGLV SDAFHLTFGC  60
   61 GLLTFSLFAM ATSRKKPDHA YSYGYKRLEV LSAFTNALFL MFMSFSLAVE ALHAFIQDES 120
  121 EHKHYLIVSA VTNLLVNLLG VWFFRNYARV NIAYRKAEDM NYHSVCLHVI SDSIRSAGLI 180
  181 LASWLLSLGV ENAEVLCLGL VSVTVFMLVM PLFKATGGVL LQMAPPNIPS SALSKCLRQI 240
  241 TSREDVTEVL QARFWEVVPG HTVGSLRLQV KSGIDERPLL QYVYDVYHDL GVQDLTLQTD 300
  301 YT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.69897
Match: 2qfiA
Description: No description for 2qfiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle