| Protein: | CAAT4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 600 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
469.0 | [0..2] | [583..956] |
|
Region A: Residues: [1-457] |
1 11 21 31 41 51
| | | | | |
1 MNSLVRRKQV DSVHLIKNDG PHQLAKKLSA VDLVAIGVGT TIGAGVYILV GTVAREHTGP 60
61 ALAVSFFIAG VAAALSACCY AELASRCPSA GSAYHYAYIC LGEGIAWLVG WALVLDYTIG 120
121 GSAIARGITP NLASFFGGLD NLPVFLARQT IPGVGIVVDP CAALLIMIVT ILLCFGIKES 180
181 STVQAIVTSV NVCTLVFIIV VGGYLACKTG WVGYDLPSGY FPFGLNGILA GSAVVFFSYI 240
241 GFDTVTSTAE EVKNPQRDLP LGIGIALLIC CILYMLLSVV IVGLVPYYSL NPDTPISSAF 300
301 GDSGMQWAAY ILTTGAITAL CASLLGSLLA QPRIFMAMAR DGLLPAFFSE ISPRTQVPVK 360
361 STIAIGVLAA ALAFFMDVAQ LSEMVSVGTL MAFTAVAVCV LVLRYVPPDG VPLSSSSQTL 420
421 SDTDESRAET ENFLVDAIES SDSPLLGNET ARDEKYF
|
| Detection Method: |  |
| Confidence: | 1.43 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [458-510] |
1 11 21 31 41 51
| | | | | |
1 GKRRKIAAWS IALVCIGVLG LASAASAERL PSFPRFTICG VSAVILLGSL ITL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [511-600] |
1 11 21 31 41 51
| | | | | |
1 GYIDEDEERH NFGHKGGFLC PFVPYLPVLC ILINTYLIIN IGAGTWIRVL IWLLIGSMIY 60
61 IFYGRSHSLL NNAVYVPTMT CTRKTTDHLA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
