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View Structure Prediction Details

Protein: DGS1_ARATH
Organism: Arabidopsis thaliana
Length: 602 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DGS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|26452571 - gi|26452571|dbj|BAC43370.1| unknown protein [Arabidopsis thaliana]
886.0 [0..1] [602..1]
gi|222625009, gi... - gi|222625009|gb|EEE59141.1| hypothetical protein OsJ_11039 [Oryza sativa Japonica Group], gi|1087084...
745.0 [0..67] [598..68]
gi|49525489 - gi|49525489|emb|CAG59106.1| unnamed protein product [Candida glabrata]
gi|50287505, gi|... - gi|50287505|ref|XP_446182.1| unnamed protein product [Candida glabrata], gi|49525489|emb|CAG59106.1|...
419.0 [0..96] [596..108]
gi|85106724 - gi|85106724|ref|XP_962241.1| hypothetical protein [Neurospora crassa OR74A]
gi|28923841, gi|... - gi|32411555|ref|XP_326258.1| hypothetical protein [Neurospora crassa], gi|28923841|gb|EAA33005.1| hy...
403.0 [0..117] [592..196]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQPPVNES TPSTALSNFG ELVPFYSSYL WNRLASLLPT SKPIFLGKIS NLYRQTVSRK  60
   61 RSISFPLPLP SDFPSSSTIT SNVSADTARI HGVLEEIMAD VLSNLHDIQK SLDFWRSRAE 120
  121 GSNARKAYFM IFERGPTAFV NESTKFVSKS LS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDSAMQHLCQ SSSSHMTERM RVLVELRSAL ASFIAQLYVE LDKRGEDLVK IPEKALPSLL  60
   61 AVINGLFSNL EGSFSHLHAV RECDSSVDGS YP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.829 a.45.1 Glutathione S-transferase (GST), C-terminal domain

Predicted Domain #3
Region A:
Residues: [245-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVFDRLPE VNEEGSQWTD CELTDAINLV HKNLEKLNSY LSVMVGKHRK PRRMTLYWVR  60
   61 YTCGAVGLSV FSIWLLRHSS LMGSSDIENW VHDAKEATMS FFSDHVEQPL LSIRDELFDT 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [365-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRKRHKGVME TEEVQLTQDS LHRMLRNFCE QATREKVPDN ASDQEMLEVV MNRYEKELVH  60
   61 PIHNLLSGEL ARGLLIQVQK LKLDIETAML ELDQILRANE INFAILAALP AFFLSIVMLT 120
  121 VLRTWLKKDS KAQGRGRIAR IHRRLLVVEI EKRIMQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.853 a.85.1 Hemocyanin, N-terminal domain

Predicted Domain #5
Region A:
Residues: [521-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YQSYIEQGRD KDAETVFGLL IYSLERLYRV VEKPARATDE WDLVKQDLIE LGRPQQQTSY  60
   61 KLTVTQRLVT VYDCLLPTLK RQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle