| Protein: | BAGP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAGP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
334.0 | [0..1] | [594..1] |
|
|
292.0 | [0..72] | [593..80] |
|
|
267.0 | [0..12] | [562..915] |
|
|
264.0 | [0..12] | [562..910] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MVQSAVEVLL PSAWEIEVAV VASVFLIASY WLFAYRGGGD DDVVGVGFDR SRLMQNLDSG 60
61 DAFDKDKIGH LRGDTQTNAA YIVKVELLAA KNLIGANLNG TSDPYAIVNC GSEKRFSSMV 120
121 PGSRNPMWGE EFNFPTDELP AKINVTIHDW DIIWKSTVLG SVTINVEREG QTGPVWHSLD 180
181 SPSGQVCLNI NAIKLPVNAP RAV
|
| Detection Method: |  |
| Confidence: | 32.39794 |
| Match: | 1dqvA |
| Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [204-319] |
1 11 21 31 41 51
| | | | | |
1 TGYAGAGRRR VTLDQQGPTI VHQKPGPLQT IFDLLPDEVV EHSYSCALER SFLYHGRMYV 60
61 SAWHICFHSN VFSKQMKVVV PLGDIDEIRR SQHALINPAI TIILRMGAGG HGVPPL
|
| Detection Method: | |
| Confidence: | 17.017729 |
| Match: | PF02893.11 |
| Description: | No description for PF02893.11 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.403 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.355 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.355 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.328 | N/A | N/A | c.12.1 | Ribosomal proteins L15p and L18e |
| View | Download | 0.276 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.255 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.255 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.230 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.223 | N/A | N/A | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.223 | N/A | N/A | b.29.1 | Concanavalin A-like lectins/glucanases |
|
Region A: Residues: [320-392] |
1 11 21 31 41 51
| | | | | |
1 GTPDGRVRYK FASFWNRNHT LKALQRAVNN YHAMLEVEKK ERAQSALRAH SSSVKGGGKV 60
61 QVKAPEDTAA VPV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.809 | a.29.8 | Description not found. |
| View | Download | 0.684 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.616 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.609 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.609 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.605 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.600 | a.246.2 | Description not found. |
| View | Download | 0.571 | d.58.10 | Acylphosphatase-like |
|
Region A: Residues: [393-594] |
1 11 21 31 41 51
| | | | | |
1 KFQAFIKEEV LVNIYNDVFA STPEQVLNVL LADDSTYTNE YRSARKDKNL NIEPWHTAEE 60
61 YDGQVREIKF RSICNSPMCP PDTAVTEWQH VVLSPDKKVL VFETVQQPHD VPFGSYFEVH 120
121 CRWRLEAKDE TSSVIDIRVG VHFKKWCLMQ SKIKAGAIDE YKKEVEVMLE VALSYLKSHS 180
181 SSSSHGDIDK SALSSPTPEN IS
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 2pcsA |
| Description: | No description for 2pcsA was found. |
