| Protein: | LCAT4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 535 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LCAT4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..1] | [535..1] |
|
|
430.0 | [0..3] | [535..2] |
|
|
417.0 | [0..1] | [535..1] |
|
|
301.0 | [0..30] | [446..24] |
|
|
290.0 | [0..23] | [453..38] |
|
|
290.0 | [0..23] | [452..38] |
|
|
289.0 | [0..23] | [448..22] |
|
|
288.0 | [0..23] | [451..36] |
|
|
288.0 | [0..23] | [449..38] |
|
Region A: Residues: [1-435] |
1 11 21 31 41 51
| | | | | |
1 MSLLLEEIIR SVEALLKLRN RNQEPYVDPN LNPVLLVPGI AGSILNAVDH ENGNEERVWV 60
61 RIFGADHEFR TKMWSRFDPS TGKTISLDPK TSIVVPQDRA GLHAIDVLDP DMIVGRESVY 120
121 YFHEMIVEMI GWGFEEGKTL FGFGYDFRQS NRLQETLDQF AKKLETVYKA SGEKKINVIS 180
181 HSMGGLLVKC FMGLHSDIFE KYVQNWIAIA APFRGAPGYI TSTLLNGMSF VNGWEQNFFV 240
241 SKWSMHQLLI ECPSIYELMC CPYFKWELPP VLELWREKES NDGVGTSYVV LESYCSLESL 300
301 EVFTKSLSNN TADYCGESID LPFNWKIMEW AHKTKQVLAS AKLPPKVKFY NIYGTNLETP 360
361 HSVCYGNEKM PVKDLTNLRY FQPTYICVDG DGTVPMESAM ADGLEAVARV GVPGEHRGIL 420
421 NDHRVFRMLK KWLNV
|
| Detection Method: |  |
| Confidence: | 6.0 |
| Match: | 1ji3A |
| Description: | Lipase L1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [436-535] |
1 11 21 31 41 51
| | | | | |
1 GEPDPFYNPV NDYVILPTTY EFEKFHENGL EVASVKESWD IISDDNNIGT TGSTVNSISV 60
61 SQPGDDQNPQ AEARATLTVQ PQSDGRQHVE LNAVSVSVDA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.500 | d.93.1 | SH2 domain |
| View | Download | 0.480 | d.129.6 | Description not found. |
| View | Download | 0.470 | b.85.7 | SET domain |
| View | Download | 0.436 | d.129.6 | Description not found. |
| View | Download | 0.410 | b.1.1 | Immunoglobulin |
| View | Download | 0.410 | b.1.1 | Immunoglobulin |
| View | Download | 0.388 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.371 | d.93.1 | SH2 domain |
| View | Download | 0.371 | d.93.1 | SH2 domain |
| View | Download | 0.355 | d.93.1 | SH2 domain |
| View | Download | 0.266 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.243 | d.93.1 | SH2 domain |
| View | Download | 0.207 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
