YRC Public Data Repository - Protein Structure Prediction

Protein:	DCV1_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	202 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCV1_YEAST.

Description	E-value	Query Range	Subject Range
YFR012W - Putative protein of unknown function DCV1_YEAST - Protein DCV1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCV1 PE=3 SV=1	3.0E-64	[1..202]	[1..202]
MUG33_SCHPO - Meiotically up-regulated gene 33 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=m... mug33 - conserved fungal protein	5.0E-34	[13..155]	[11..142]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	3.0E-30	[10..152]	[51..196]
gi\|85099060 - gi\|85099060\|ref\|XP_960709.1\| hypothetical protein NCU01357 [Neurospora crassa OR74A] gi\|28922227, gi\|... - gi\|32412740\|ref\|XP_326850.1\| hypothetical protein ( (AL353822) related to palI protein [Neurospora c...	4.0E-29	[10..152]	[10..155]
PALI_EMENI - pH-response regulator protein palI/RIM9 OS=Emericella nidulans GN=palI PE=1 SV=2 PALI_EMENI - pH-response regulator protein palI/RIM9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 11...	2.0E-25	[12..107]	[10..102]
gi\|16904252 - gi\|16904252\|gb\|AAL30833.1\|AF440398_1 pal1-like protein [Mycosphaerella graminicola]	7.0E-17	[12..105]	[9..92]

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Predicted Domain #1

Region A:
Residues: [1-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNYKLILLF SSFLQLISFS GFMICCLTSP IIRNWGLAQA AGVSYGTFGY CKTLNSFSCS  60
   61 RVRLIYNTSK EILPGPSLER WWLSPKARHT IGGLLISIPV ATCLTFISFA LPLVIIFLFQ 120
  121 TGGTNVSLIT SNAILHILTL LSTIFACTVI LLLCMHRDPV TISSLYDLVW LANCSLFPLL 180
  181 VIGVHFLSFR FDTSAQSDRK HS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits