YRC Public Data Repository - Protein Structure Prediction

Protein:	AQY22_YEAS2
Organism:	Saccharomyces cerevisiae JAY291
Length:	149 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AQY22_YEAS2.

Description	E-value	Query Range	Subject Range
AQY22_YEAS2 - Aquaporin-like protein 2 OS=Saccharomyces cerevisiae (strain JAY291) GN=AQY2-2 PE=3 SV=1 AQY2_YEAST - Aquaporin-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AQY2 PE=1 SV=1 AQY2 - Water channel that mediates the transport of water across cell membranes, only expressed in prolifer... AQY22_YEAS7 - Aquaporin-like protein 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=AQY2-2 PE=3 SV=1	6.0E-77	[1..149]	[1..149]
gi\|12484110 - gi\|12484110\|gb\|AAG53971.1\| aquaporin 2 [Saccharomyces chevalieri] asmbl_8495\|m.631... - TR64\|c0_g1_i1\|g.66 ORF TR64\|c0_g1_i1\|g.66 TR64\|c0_g1_i1\|m.66 type:complete len:290 (+) TR64\|c0_g1_i...	3.0E-55	[1..108]	[1..108]
gi\|18652256 - gi\|18652256\|gb\|AAL77035.1\|AF467246_1 aquaporin [Blumeria graminis f. sp. hordei]	7.0E-22	[38..109]	[24..93]

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Predicted Domain #1

Region A:
Residues: [1-149]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNESNDLEK NISHLDPTGV DNAYIPPEQP ETKHSRFNID RDTLRNHFIA AVGEFCGTFM  60
   61 FLWCAYVICN VANHDVALTT EPEGSHPGQL IMIALGFGFS VMFSIWCFWW GFEPSRFSLF 120
  121 VFGQSHLTSQ MCSDVVSSDH CWDGCWWCR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits