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View Structure Prediction Details

Protein: HOL3_ARATH
Organism: Arabidopsis thaliana
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOL3_ARATH.

Description E-value Query
Range
Subject
Range
UBIE_VIBVU - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Vibrio vulnificus (strain CMCP6) GN=...
UBIE_VIBVY - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Vibrio vulnificus (strain YJ016) GN=...
UBIE_VIBVU - Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Vibrio vulnificus GN=ubiE PE=3 SV=1
146.0 [0..2] [225..18]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENAGKATSL QSSRDLFHRL MSENSSGGWE KSWEAGATPW DLGKPTPVIA HLVETGSLPN  60
   61 GRALVPGCGT GYDVVAMASP DRHVVGLDIS KTAVERSTKK FSTLPNAKYF SFLSEDFFTW 120
  121 EPAEKFDLIF DYTFFCAFEP GVRPLWAQRM EKLLKPGGEL ITLMFPIDER SGGPPYEVSV 180
  181 SEYEKVLIPL GFEAISIVDN ELAVGPRKGM EKLGRWKKSS TFHSTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle