| Protein: | gi|42563304, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42563304, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
507.0 | [0..6] | [560..32] |
|
Region A: Residues: [1-560] |
1 11 21 31 41 51
| | | | | |
1 MVSLLCFRSV GVYLLRQATP IITRGGRISR PISKNLCFVL FSSSPKTSLL KPRAQSSENN 60
61 SLVFKGDERV VGLVGKVVDD AFDKVDRFQS SSTIVAIVTP IGGPPGAVGI VRLSGPKAVE 120
121 VARRVFRSAK KTKKKESDSD TWRPKSHFVE YGAVVDSNGN VVDEVLAVPM LAPRSYTRED 180
181 VVELQCHGSE VCLRRVLRTC VEAGARLAEP GEFTLRAFLN GRLDLSQAEN VEKLISAKSS 240
241 AAADAALEGI QGGFSSLVKS LRAQCIELLT EIEARLDFED EMPPLDIESV INKITSMSQD 300
301 VESALDTANY DKLLQSGLQI AIVGRPNVGK SSLLNAWSKS ERAIVTEVAG TTRDVVEANV 360
361 TVRGVPITLL DTAGIRETND IVEKIGVERS ETAAKVADVI IMAVSAVEGW TEEDTELLRK 420
421 IQSDKPMILV MNKIDCAPPG SCDQLEDQRK KEEVFHKSVF TSAVTGQGIE ELEDAILEIL 480
481 GLDRVPTGGH QWTVNQRQCE QLVRTKEALV RLREAIEDEI PIDFWTIELR EAALSLAQIS 540
541 GQDVSEEVLS SIFAKFCIGK
|
| Detection Method: |  |
| Confidence: | 86.69897 |
| Match: | 1xzpA |
| Description: | Structure of the GTP-binding protein TrmE from Thermotoga maritima |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| methyltransferase activity | 3.28983380541263 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 3.20782575104451 | bayes_pls_golite062009 |
| catalytic activity | 1.65079399897053 | bayes_pls_golite062009 |
| transferase activity | 1.3676947912529 | bayes_pls_golite062009 |
| coenzyme binding | 1.08379167900905 | bayes_pls_golite062009 |
| cofactor binding | 0.96468813458034 | bayes_pls_golite062009 |
| ATP binding | 0.60527666756293 | bayes_pls_golite062009 |
| aminomethyltransferase activity | 0.573831999310668 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.573214556107072 | bayes_pls_golite062009 |
| nucleic acid binding | 0.544057265221809 | bayes_pls_golite062009 |
| ligase activity | 0.417681194526243 | bayes_pls_golite062009 |
| binding | 0.394312443474767 | bayes_pls_golite062009 |
| RNA helicase activity | 0.18362676509797 | bayes_pls_golite062009 |
| DNA binding | 0.156173690421144 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.0388696977166548 | bayes_pls_golite062009 |
