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View Structure Prediction Details

Protein: RL19_BRADU
Organism: Bradyrhizobium japonicum USDA 110
Length: 126 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL19_BRADU.

Description E-value Query
Range		 Subject
Range
RL19_BARHE - 50S ribosomal protein L19 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) GN=rplS...
RL19_BARHE - 50S ribosomal protein L19 OS=Bartonella henselae GN=rplS PE=3 SV=1
 184.0 [0..1] [126..1]
RL19_SPHAL - 50S ribosomal protein L19 OS=Sphingopyxis alaskensis GN=rplS PE=3 SV=1
RL19_SPHAL - 50S ribosomal protein L19 OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) GN=rplS...
 182.0 [0..1] [126..1]
RL19_NITHX - 50S ribosomal protein L19 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplS PE=3 SV=1
 182.0 [0..1] [124..1]
RL19_XANP2 - 50S ribosomal protein L19 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplS PE=3 SV...
 181.0 [0..1] [122..1]
RL19_RHOP2 - 50S ribosomal protein L19 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplS PE=3 SV=1
RL19_RHOPS - 50S ribosomal protein L19 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplS PE=3 SV=1
 181.0 [0..1] [124..1]
rplS, L19 - rplS, L19 50s ribosomal protein L19 266732:267121 reverse MW:14297
RL19_RHOPT - 50S ribosomal protein L19 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplS PE=3 SV=1
RL19_RHOPA - 50S ribosomal protein L19 OS=Rhodopseudomonas palustris GN=rplS PE=1 SV=1
 181.0 [0..1] [124..1]
RL19_AROAE - 50S ribosomal protein L19 OS=Aromatoleum aromaticum (strain EbN1) GN=rplS PE=3 SV=1
 180.0 [0..1] [126..1]
RL19_NITWN - 50S ribosomal protein L19 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplS PE=3 SV=1
 180.0 [0..1] [124..1]
RL19_BRASB - 50S ribosomal protein L19 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplS PE=3 SV=1
 180.0 [0..1] [124..1]
RL19_RHOPB - 50S ribosomal protein L19 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplS PE=3 SV=1
 180.0 [0..1] [124..1]

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Predicted Domain #1
Region A:
Residues: [1-126] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLIKQLEQE QFDKLSAGKD IPEFGPGDTV IVNVKVVEGD RTRVQAYEGV CIGRSGGGLN  60
   61 ESFTVRKISY GEGVERVFPV MSPMIDSIKV VRRGKVRRAK LYYLRNLRGK SARIVEKQDR 120
  121 QAAVGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 1vs6P
Description: No description for 1vs6P was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle