YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|809733\|emb\|CA...
Organism:	Methanococcus voltae PS
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|809733|emb|CA....

Description	E-value	Query Range	Subject Range
gi\|189346716, gi... - gi\|67917635\|ref\|ZP_00511240.1\| Methyl-viologen-reducing hydrogenase, delta subunit [Chlorobium limic...	231.0	[0..1]	[144..1]
gi\|194336393, gi... - gi\|68549004\|ref\|ZP_00588472.1\| Methyl-viologen-reducing hydrogenase, delta subunit [Pelodictyon phae...	230.0	[0..1]	[144..1]
gi\|21647223, gi\|... - gi\|21674070\|ref\|NP_662135.1\| hydrogenase, methyl-violgen-reducing type, delta subunit [Chlorobium te...	229.0	[0..1]	[144..1]
gi\|148265605, gi... - gi\|88934373\|ref\|ZP_01140016.1\| heterodisulfide reductase subunit [Geobacter uraniumreducens Rf4], gi...	228.0	[0..1]	[143..28]
gi\|67775698, gi\|... - gi\|67935288\|ref\|ZP_00528310.1\| Methyl-viologen-reducing hydrogenase, delta subunit [Chlorobium phaeo...	228.0	[0..1]	[144..1]
gi\|78188997, gi\|... - gi\|78188997\|ref\|YP_379335.1\| hydrogenase, methyl-violgen-reducing type, delta subunit [Chlorobium ch...	227.0	[0..1]	[144..1]
gi\|71283026, gi\|... - gi\|71482176\|ref\|ZP_00661875.1\| Methyl-viologen-reducing hydrogenase, delta subunit [Prosthecochloris...	224.0	[0..1]	[143..1]
gi\|110598343, gi... - gi\|110598343\|ref\|ZP_01386617.1\| Methyl-viologen-reducing hydrogenase, delta subunit [Chlorobium ferr...	224.0	[0..1]	[144..1]
gi\|78186972, gi\|... - gi\|78186972\|ref\|YP_375015.1\| hydrogenase, methyl-violgen-reducing type, delta subunit [Pelodictyon l...	224.0	[0..1]	[143..1]
gi\|44921142, gi\|... - gi\|45358384\|ref\|NP_987941.1\| coenzyme F420-non-reducing hydrogenase subunit delta [Methanococcus mar...	223.0	[0..1]	[140..1]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENWEPKIV GFCCNWCTYG GADTAGVGRM QYPPSIRIIR VMCSGRIEPS FILKAFKEGA  60
   61 DGVFIGGCHP GDCHYDAGNY KWQRRVMMLY DMLDELGIEK ERVMHEWISA SEGEKFQIAM 120
  121 NDIYDKIKAM GPCTLKENTG KIDE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	81.522879
Match:	PF02662.7
Description:	No description for PF02662.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits