YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|17431217
Organism:	Ralstonia solanacearum
Length:	157 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17431217.

Description	E-value	Query Range	Subject Range
gi\|78065038, gi\|... - gi\|78065038\|ref\|YP_367807.1\| hypothetical protein Bcep18194_A3562 [Burkholderia sp. 383], gi\|7796578... gi\|118649597, gi... - gi\|170731801\|ref\|YP_001763748.1\| type VI secretion system lysozyme-related protein [Burkholderia cen... gi\|198034787, gi... - gi\|206558750\|ref\|YP_002229510.1\| putative type VI secretion system protein TssE [Burkholderia cenoce... gi\|254246493, gi... - gi\|84356550\|ref\|ZP_00981392.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|67091937, gi\|... - gi\|67660474\|ref\|ZP_00457820.1\| Protein of unknown function DUF1316 [Burkholderia cenocepacia AU 1054... gi\|67663239, gi\|... - gi\|67663239\|ref\|ZP_00460522.1\| Protein of unknown function DUF1316 [Burkholderia cenocepacia HI2424]...	171.0	[0..1]	[156..1]
gi\|83719917, gi\|... - gi\|83719917\|ref\|YP_443468.1\| hypothetical protein BTH_I2961 [Burkholderia thailandensis E264], gi\|83... gi\|167621168 - gi\|167621168\|ref\|ZP_02389799.1\| hypothetical protein BthaB_32994 [Burkholderia thailandensis Bt4] gi\|167583009 - gi\|167583009\|ref\|ZP_02375883.1\| hypothetical protein BthaT_32993 [Burkholderia thailandensis TXDOH]	171.0	[0..1]	[156..1]
gi\|67545692, gi\|... - gi\|67545692\|ref\|ZP_00423612.1\| Protein of unknown function DUF1316 [Burkholderia vietnamiensis G4], ...	170.0	[0..1]	[156..1]
gi\|254253401, gi... - gi\|84360557\|ref\|ZP_00985255.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ...	169.0	[0..1]	[156..1]
gi\|52211127, gi\|... - gi\|53720713\|ref\|YP_109699.1\| hypothetical protein BPSL3104 [Burkholderia pseudomallei K96243], gi\|52...	169.0	[0..1]	[156..11]
gi\|126221385, gi... - gi\|67737973\|ref\|ZP_00488689.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|121600053, gi... - gi\|84524084\|ref\|ZP_01011220.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|67669090, gi\|... - gi\|99907389\|ref\|ZP_01315330.1\| hypothetical protein Bpse1_03005333 [Burkholderia pseudomallei 1655],... gi\|67681718, gi\|... - gi\|90291226\|ref\|ZP_01210858.1\| hypothetical protein Bpse17_02004132 [Burkholderia pseudomallei 1710a... gi\|85066033 - gi\|85066033\|ref\|ZP_01026886.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|100264036, gi... - gi\|87314895\|ref\|ZP_01095932.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|254190430, gi... - gi\|67754060\|ref\|ZP_00492977.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|67759149, gi\|... - gi\|67759149\|ref\|ZP_00497892.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|83619111 - gi\|83619111\|ref\|ZP_00929554.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|83626231 - gi\|83626231\|ref\|ZP_00936457.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|126226310, gi... - gi\|82529822\|ref\|ZP_00889062.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|161358343, gi... - gi\|82533319\|ref\|ZP_00892400.1\| hypothetical protein Bpse110_02005387 [Burkholderia pseudomallei 1106... gi\|238521451, gi... - gi\|67640684\|ref\|ZP_00439482.1\| type VI secretion system lysozyme-related protein [Burkholderia malle... gi\|67645631, gi\|... - gi\|67645631\|ref\|ZP_00443912.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|83677529, gi\|... - gi\|83677529\|ref\|ZP_00939275.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|67635091, gi\|... - gi\|67635091\|ref\|ZP_00434052.1\| COG3518: Uncharacterized protein conserved in bacteria [Burkholderia ... gi\|243062830, gi... - gi\|243062830\|gb\|EES45016.1\| conserved hypothetical protein [Burkholderia mallei PRL-20], gi\|16700141... gi\|167817635 - gi\|167817635\|ref\|ZP_02449315.1\| hypothetical protein Bpse9_21026 [Burkholderia pseudomallei 91] gi\|167826039 - gi\|167826039\|ref\|ZP_02457510.1\| hypothetical protein Bpseu9_20379 [Burkholderia pseudomallei 9] gi\|167721451 - gi\|167721451\|ref\|ZP_02404687.1\| hypothetical protein BpseD_20745 [Burkholderia pseudomallei DM98] gi\|167740420 - gi\|167740420\|ref\|ZP_02413194.1\| hypothetical protein Bpse14_20315 [Burkholderia pseudomallei 14] gi\|124292926, gi... - gi\|124384906\|ref\|YP_001027690.1\| hypothetical protein BMA10229_A1710 [Burkholderia mallei NCTC 10229... gi\|167908666 - gi\|167908666\|ref\|ZP_02495871.1\| hypothetical protein BpseN_40974 [Burkholderia pseudomallei NCTC 131... gi\|134283214, gi... - gi\|134283214\|ref\|ZP_01769915.1\| conserved hypothetical protein [Burkholderia pseudomallei 305], gi\|1... gi\|167912761 - gi\|167912761\|ref\|ZP_02499852.1\| hypothetical protein Bpse112_19891 [Burkholderia pseudomallei 112] gi\|167847526 - gi\|167847526\|ref\|ZP_02473034.1\| hypothetical protein BpseB_19794 [Burkholderia pseudomallei B7210] gi\|167896112 - gi\|167896112\|ref\|ZP_02483514.1\| hypothetical protein Bpse7_20373 [Burkholderia pseudomallei 7894] gi\|217424688, gi... - gi\|217424688\|ref\|ZP_03456185.1\| conserved hypothetical protein [Burkholderia pseudomallei 576], gi\|2... gi\|167920723 - gi\|167920723\|ref\|ZP_02507814.1\| hypothetical protein BpseBC_19401 [Burkholderia pseudomallei BCC215] gi\|254174803, gi... - gi\|254174803\|ref\|ZP_04881464.1\| conserved hypothetical protein [Burkholderia mallei ATCC 10399], gi\|... gi\|76810056, gi\|... - gi\|76810056\|ref\|YP_335006.1\| hypothetical protein BURPS1710b_3641 [Burkholderia pseudomallei 1710b],... gi\|225929822, gi... - gi\|226198302\|ref\|ZP_03793873.1\| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9... gi\|237814023, gi... - gi\|237814023\|ref\|YP_002898474.1\| type VI secretion system lysozyme-related protein [Burkholderia pse...	168.0	[0..1]	[156..1]
gi\|206589692, gi... - gi\|207724471\|ref\|YP_002254868.1\| protein of unknown function duf1316 [Ralstonia solanacearum MolK2],... gi\|83748110, gi\|... - gi\|83748110\|ref\|ZP_00945138.1\| Hypothetical protein RRSL_01736 [Ralstonia solanacearum UW551], gi\|83...	168.0	[0..1]	[157..1]
gi\|74019468, gi\|... - gi\|74019468\|ref\|ZP_00690084.1\| Protein of unknown function DUF1316 [Burkholderia ambifaria AMMD], gi...	168.0	[0..1]	[156..1]
gi\|84368888, gi\|... - gi\|84624948\|ref\|YP_452320.1\| hypothetical protein XOO_3291 [Xanthomonas oryzae pv. oryzae MAFF 31101...	151.0	[0..1]	[156..1]
gi\|188577931, gi... - gi\|188577931\|ref\|YP_001914860.1\| hypothetical protein PXO_02048 [Xanthomonas oryzae pv. oryzae PXO99... gi\|166711136 - gi\|166711136\|ref\|ZP_02242343.1\| hypothetical protein Xoryp_06620 [Xanthomonas oryzae pv. oryzicola B... gi\|58427695, gi\|... - gi\|58583101\|ref\|YP_202117.1\| hypothetical protein XOO3478 [Xanthomonas oryzae pv. oryzae KACC10331],...	151.0	[0..1]	[156..1]

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Predicted Domain #1

Region A:
Residues: [1-157]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGFEPSLLD KLFDDEPHAP LPTALRQLSL EELKSTVARD IESLLNTRIV FEEDDLQSLP  60
   61 ECKRSLLTYG LNDFAGLSLA SFYDRNYICQ SLTKAIERHE PRLQHVSVSL EINERATNAL 120
  121 CFGITAVLLV GPAREPVSFD AMLQPSTLRY SVSRGRG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	7.30103
Match:	2ia7A
Description:	No description for 2ia7A was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.074040936650541	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: