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View Structure Prediction Details

Protein: ENSMMUG000000055...
Organism: Macaca mulatta
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSMMUG000000055....

Description E-value Query
Range
Subject
Range
gi|73958783 - gi|73958783|ref|XP_862159.1| PREDICTED: similar to ARL-6 interacting protein-1 (Aip-1) isoform 8 [Ca...
9.0E-52 [1..130] [167..296]
gi|76640848 - gi|76640848|ref|XP_873532.1| PREDICTED: similar to ribosomal protein S15a [Bos taurus]
8.0E-51 [1..130] [118..247]
gi|50755847 - gi|50755847|ref|XP_425249.1| PREDICTED: similar to Rps15a protein [Gallus gallus]
2.0E-49 [1..130] [94..223]
gi|30109302 - gi|30109302|gb|AAH51205.1| Rps15a protein [Mus musculus]
3.0E-49 [1..130] [9..138]
gi|114594801 - gi|114594801|ref|XP_523306.2| PREDICTED: similar to Rps15a protein [Pan troglodytes]
7.0E-49 [1..130] [1..130]
gi|47086525, gi|... - gi|78174360|gb|AAI07524.1| Ribosomal protein S15a [Danio rerio], gi|47086525|ref|NP_997927.1| riboso...
3.0E-48 [1..130] [1..130]
gi|76780132, gi|... - gi|76780132|gb|AAI06350.1| MGC130892 protein [Xenopus laevis], gi|67677960|gb|AAH97585.1| MGC114789 ...
gi|542157969|ref... - PREDICTED: 40S ribosomal protein S15a [Zonotrichia albicollis]
gi|18000277 - gi|18000277|gb|AAL54900.1|AF159546_1 ribosomal protein S15 isoform [Lapemis hardwickii]
gi|118098060, gi... - gi|118098060|ref|XP_425249.2| PREDICTED: similar to ribosomal protein S15 isoform 2 [Gallus gallus],...
gi|156717896, gi... - gi|156717896|ref|NP_001096489.1| hypothetical protein LOC100125111 [Xenopus (Silurana) tropicalis], ...
8.0E-48 [1..130] [1..130]
gi|1082767, gi|6... - gi|666047|emb|CAA59127.1| ribosomal protein S15a [Homo sapiens], pir||S52339 ribosomal protein S15a,...
8.0E-48 [1..130] [1..130]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRMNVLADA LKSINNAEKR GKRQVLIRPC SKVIVRFLTV MMKHGYIGEF EIIDDHRAGK  60
   61 IVVNLTGRLN KCGVISPRFD VQLKDLEKWQ NNLLPSRQFG FIVLTTSAGI MDHEEARRKH 120
  121 TGGKILGFFF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.154902
Match: 1s1hH
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle