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View Structure Prediction Details

Protein: gi|17546792
Organism: Ralstonia solanacearum GMI1000
Length: 291 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17546792.

Description E-value Query
Range
Subject
Range
gi|68555597, gi|... - gi|94309861|ref|YP_583071.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ralstonia metalli...
222.0 [0..1] [288..1]
gi|207742723, gi... - gi|207742723|ref|YP_002259115.1| cdp-diacylglycerol--serine o-phosphatidyltransferase protein [Ralst...
gi|83727037, gi|... - gi|83746287|ref|ZP_00943340.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ralstonia solan...
221.0 [0..1] [291..1]
gi|113867060, gi... - gi|113867060|ref|YP_725549.1| phosphatidylserine synthase [Ralstonia eutropha H16], gi|113525836|emb...
204.0 [0..1] [283..1]
gi|73540654, gi|... - gi|73540654|ref|YP_295174.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ralstonia eutroph...
203.0 [0..1] [283..1]
gi|67548313, gi|... - gi|67548313|ref|ZP_00426204.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia vi...
202.0 [0..1] [280..1]
gi|170136956, gi... - gi|170698098|ref|ZP_02889178.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia a...
gi|72607607, gi|... - gi|74019589|ref|ZP_00690203.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia am...
gi|172061220, gi... - gi|172061220|ref|YP_001808872.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia ...
202.0 [0..1] [280..1]
gi|90022183, gi|... - gi|90022183|ref|YP_528010.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Saccharophagus de...
202.0 [0..1] [291..1]
gi|91686555, gi|... - gi|91782601|ref|YP_557807.1| CDP-diacylglycerol--serine O- phosphatidyltransferase [Burkholderia xen...
201.0 [0..1] [281..1]
gi|46311347, gi|... - gi|78067057|ref|YP_369826.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia sp. ...
200.0 [0..1] [280..1]
gi|67104588, gi|... - gi|67662003|ref|ZP_00459294.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia ce...
gi|67094210, gi|... - gi|67658075|ref|ZP_00455449.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia ce...
gi|194558632, gi... - gi|254247647|ref|ZP_04940968.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia c...
gi|169816862, gi... - gi|170733620|ref|YP_001765567.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia ...
199.0 [0..1] [280..1]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAFNRRKKR FTASNVMHLR PLRHNQPRSD DDELEVVRPR RRGIYLLPNA FTTAALFAGF  60
   61 FAIVQAMNLN FETAAIAIFA AMVLDGMDGR VARITNTQSA FGEQYDSLSD MCSFGVAPAL 120
  121 VMYEWILRDL GKWGWLAAFV YCAGAALRLA RFNTNIGVVD KRFFQGMPSP AAAALIAGFV 180
  181 WLAIDNKLPV KELWMPWVAF GLTLYAGLSM VSNAPFYSG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.677781
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [220-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KALDVRHRVP FGVMVLVLVL FVVVSSDPPV ALFGLFVVYA VSGYVLWGWR ALHGRPGSPR  60
   61 LPREPVPADA DE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle