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View Structure Prediction Details

Protein: ENSPTRT00000039539
Organism: Pan troglodytes
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSPTRT00000039539.

Description E-value Query
Range
Subject
Range
gi|109468066 - gi|109468066|ref|XP_342421.3| PREDICTED: similar to C06A6.3 [Rattus norvegicus]
0.0 [1..319] [101..417]
MB12B_MOUSE - Multivesicular body subunit 12B OS=Mus musculus GN=Mvb12b PE=1 SV=2
0.0 [1..319] [1..317]
gi|10440373 - gi|10440373|dbj|BAB15722.1| FLJ00022 protein [Homo sapiens]
0.0 [1..319] [26..344]
gi|114626787 - gi|114626787|ref|XP_001141271.1| PREDICTED: similar to FLJ00022 protein [Pan troglodytes]
0.0 [1..319] [99..417]
gi|73968209 - gi|73968209|ref|XP_537843.2| PREDICTED: similar to C06A6.3 [Canis familiaris]
0.0 [22..319] [158..455]
gi|74267878 - gi|74267878|gb|AAI03137.1| FAM125B protein [Bos taurus]
0.0 [2..291] [1..290]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSCFCVRRS RDPPPPQPPP PPPQRGTDQS TMPEVKDLSE ALPETSMDPI TGVGVVASRN  60
   61 RAPTGYDVVA QTADGVDADL WKDGLFKSKV TRYLCFTRSF SKENSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGNVLVDMKL IDIKDTLPVG FIPIQETVDT QEVAFRKKRL CIKFIPRDST EAAICDIRIM  60
   61 GRTKQAPPQY TFIGELNSMG IWYRMGRVPR NHDSSQPTTP SQSSAASTPA PNLPRHISLT 120
  121 LPATFRGRNS TRTDYEYQHS NLYAISAMDG VPFMISEKFS CVPESMQPFD LLGITIKSLA 180
  181 EIEKEYEYSF RTEQSAAARL PPSPTRCQQI PQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle