YRC Public Data Repository - Protein Structure Prediction

Protein:	ENSPTRT00000037945
Organism:	Pan troglodytes
Length:	101 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSPTRT00000037945.

Description	E-value	Query Range	Subject Range
gi\|50731850 - gi\|50731850\|ref\|XP_418387.1\| PREDICTED: similar to e(y)2 protein; DC6 protein; e(y)2 homolog; enhanc...	164.0	[0..5]	[101..229]
gi\|109087263 - gi\|109087263\|ref\|XP_001087516.1\| PREDICTED: similar to e(y)2 protein [Macaca mulatta]	155.0	[0..2]	[101..52]
gi\|114621341 - gi\|114621341\|ref\|XP_001135431.1\| PREDICTED: similar to DC6 [Pan troglodytes]	150.0	[0..2]	[101..30]
ENY2_XENLA - Transcription and mRNA export factor ENY2 OS=Xenopus laevis GN=eny2 PE=3 SV=1	139.0	[0..6]	[101..1]
SUS1_ARATH - Transcription and mRNA export factor SUS1 OS=Arabidopsis thaliana GN=SUS1 PE=3 SV=1	129.0	[0..7]	[99..22]
gi\|47207340 - gi\|47207340\|emb\|CAF92801.1\| unnamed protein product [Tetraodon nigroviridis]	129.0	[0..6]	[101..1]
gi\|63748712, gi\|... - gi\|94409272\|ref\|XP_993917.1\| PREDICTED: similar to e(y)2 protein [Mus musculus], gi\|63748712\|ref\|XP_...	129.0	[0..6]	[101..1]
ENY2_DANRE - Transcription and mRNA export factor ENY2 OS=Danio rerio GN=eny2 PE=3 SV=1	126.0	[0..6]	[100..1]

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Predicted Domain #1

Region A:
Residues: [1-101]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVSKMNKDA QMRAAINQKL IETGERERLK ELLRAKLIEC GWKDQLKAHC KEVIKEKGLE  60
   61 HVTVDDLVAE ITPKGRALVP DSVKKELLQR IRTFLAQHAS L

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits