YRC Public Data Repository - Protein Structure Prediction

Protein:	ENSPTRT00000011615
Organism:	Pan troglodytes
Length:	244 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSPTRT00000011615.

Description	E-value	Query Range	Subject Range
gi\|73963786 - gi\|73963786\|ref\|XP_853466.1\| PREDICTED: similar to Protein C14orf166 [Canis familiaris]	425.0	[0..1]	[244..95]
gi\|109083601 - gi\|109083601\|ref\|XP_001098671.1\| PREDICTED: similar to Protein C14orf166 [Macaca mulatta]	424.0	[0..1]	[244..168]
gi\|114653040 - gi\|114653040\|ref\|XP_509946.2\| PREDICTED: similar to CGI-99 protein [Pan troglodytes]	421.0	[0..1]	[244..109]
CN166_MOUSE - UPF0568 protein C14orf166 homolog OS=Mus musculus PE=1 SV=1	411.0	[0..1]	[244..1]
gi\|55613379 - gb\|AAV54070.1\| CLE [Homo sapiens] gi\|55613379 - gi\|55613379\|gb\|AAV54070.1\| CLE [Homo sapiens]	409.0	[0..1]	[244..1]
gi\|78369460, gi\|... - gi\|78369460\|ref\|NP_001030357.1\| homeobox prox 1 [Bos taurus], gi\|74354567\|gb\|AAI02277.1\| Chromosome ...	403.0	[0..1]	[244..1]
CN166_DANRE - UPF0568 protein C14orf166 homolog OS=Danio rerio GN=zgc:56576 PE=2 SV=1	391.0	[0..1]	[244..1]
gi\|45382455, gi\|... - gi\|45382455\|ref\|NP_990700.1\| chromosome 14 open reading frame 166 [Gallus gallus], gi\|1184955\|gb\|AAA...	390.0	[0..1]	[244..1]
gi\|45478224, gi\|... - gi\|45478224\|gb\|AAS66283.1\| LRRGT00192 [Rattus norvegicus], gi\|114145722\|ref\|NP_001041339.1\| hypothet...	383.0	[0..1]	[244..1]

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Predicted Domain #1

Region A:
Residues: [1-103]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRRKLTALD YHNPAGFNCK DETEFRNFIV WLEDQKIRHY KIEDRGNLRN IHSSDWPKFF  60
   61 EKYLRDVNCP FKIQDRQEAI DWLLGLAVRL EYGDNAEKYK DLV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [104-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDNSKTADNA TKNAEPLINL DVNNPDFKAG VMALANLLQI QRHD

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [148-244]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYLVMLKAIR ILVQERLTQD AVAKANQTKE GLPVALDKHI LGFDTGDAVL NEAAQILRLL  60
   61 HIEELRELQT KINEAIVAVQ AIIADPKTDH RLGKVGR

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits