YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|17427362
Organism:	Ralstonia solanacearum
Length:	267 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17427362.

Description	E-value	Query Range	Subject Range
GPMA_BDEBA - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bdellovibrio bacteriovorus (strain ATCC... GPMA_BDEBA - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bdellovibrio bacteriovorus GN=gpmA PE=3...	273.0	[0..20]	[267..1]
GPMA_CHLPM - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlorobium phaeovibrioides (strain DSM ...	273.0	[0..20]	[266..1]
gi\|60466735, gi\|... - gi\|66809133\|ref\|XP_638289.1\| phosphoglycerate mutase [Dictyostelium discoideum AX4], gi\|60466735\|gb\|... PGAM_DICDI - Probable phosphoglycerate mutase OS=Dictyostelium discoideum GN=gpmA PE=1 SV=1	271.0	[0..19]	[267..1]
gi\|23508399, gi\|... - gi\|23508399\|ref\|NP_701068.1\| phosphoglycerate mutase, putative [Plasmodium falciparum 3D7], gi\|23496...	271.0	[0..18]	[267..1]
gi\|58177556, gi\|... - gi\|58177557\|pdb\|1XQ9\|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium Falciparum At 2...	270.0	[0..18]	[267..9]
GPMA_SOLUE - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Solibacter usitatus (strain Ellin6076) ...	270.0	[0..20]	[267..1]
gi\|46229585 - gi\|46229585\|gb\|EAK90403.1\| glycolytic phosphoglycerate mutase [Cryptosporidium parvum Iowa II] gi\|66363230 - gi\|66363230\|ref\|XP_628581.1\| glycolytic phosphoglycerate mutase [Cryptosporidium parvum Iowa II]	268.0	[0..19]	[267..1]
gi\|7437400 - gi\|7437400\|pir\|\|A70182 phosphoglycerate mutase (gpmA) homolog - Lyme disease spirochete gi\|2688589, gi\|1... - gi\|2688589\|gb\|AAC67007.1\| phosphoglycerate mutase (gpmA) [Borrelia burgdorferi B31], gi\|15595003\|ref...	268.0	[0..20]	[267..6]
GPMA_PORGI - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Porphyromonas gingivalis (strain ATCC B... GPMA_PORGI - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Porphyromonas gingivalis GN=gpmA PE=3 S... GPMA_PORG3 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Porphyromonas gingivalis (strain ATCC 3...	268.0	[0..20]	[267..1]
gi\|67624535 - gi\|67624535\|ref\|XP_668550.1\| phosphoglycerate mutase [Cryptosporidium hominis TU502] gi\|54659749 - gi\|54659749\|gb\|EAL38313.1\| phosphoglycerate mutase [Cryptosporidium hominis]	268.0	[0..19]	[267..1]

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Predicted Domain #1

Region A:
Residues: [1-267]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQRVPATAQ VFSLLIMAVM HKLVLIRHGE STWNLENRFT GWVDVDLTDT GIAQARQGGR  60
   61 LLREAGFTFD LAYTSVLKRA IRTLWHVQDE MDLMWIPTRT EWRLNERHYG GLSGLNKAET 120
  121 AAQYGDQQVL VWRRSYDTPP PALEAGDERD AYGNPRYAGL PREQVPLTEC LKDTVARVLP 180
  181 LWETSIAPDI KSGKRVVIAA HGNSIRALVK YLDNISDDDI VGLNIPNGTP LVYELDANLK 240
  241 PIRHYYLGDQ EAIAASLAAV AGQGKAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	72.522879
Match:	1xq9A
Description:	Structure of Phosphoglycerate Mutase from Plasmodium falciparum at 2.6 Resolution
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits