| Protein: | gi|19076040, gi|... |
| Organism: | Schizosaccharomyces pombe |
| Length: | 412 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19076040, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
425.0 | [0..1] | [406..1] |
|
|
381.0 | [0..13] | [406..506] |
|
|
379.0 | [0..6] | [399..169] |
|
|
374.0 | [0..16] | [396..146] |
|
|
372.0 | [0..40] | [402..598] |
|
|
371.0 | [0..42] | [403..602] |
|
|
371.0 | [0..40] | [402..593] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MSTKVKQKQK QKHRPKPSLD RSDSTKRAAR AARFSTTLDA NFQALKKKRK DEQESFQAKQ 60
61 STNWEKSSVL VGTCRQMCPE FELEERKLQH AIHPYEL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.662 | a.24.3 | Cytochromes |
| View | Download | 0.515 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.434 | a.7.1 | Spectrin repeat |
| View | Download | 0.350 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.301 | a.3.1 | Cytochrome c |
|
Region A: Residues: [98-147] |
1 11 21 31 41 51
| | | | | |
1 DPVSKQAHPS LAVKAYHRPA AGKGPILPSD VRPPSILKNT IDYLFKVILD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.561 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.552 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.437 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.323 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.289 | N/A | N/A | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [148-252] |
1 11 21 31 41 51
| | | | | |
1 RYSLREAHAF VRDRTRAVRQ DFSVQSSFSQ DSVYCHELIA RFHIISLHEL AHTPNFSRQQ 60
61 EIEQLSKSME ILYTLGQLYD YMHLRKEHCT HEAEFRAYMV LLSLG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.888 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.866 | a.24.3 | Cytochromes |
| View | Download | 0.855 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.845 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.821 | a.7.8 | GAT domain |
|
Region A: Residues: [253-412] |
1 11 21 31 41 51
| | | | | |
1 DPSVGLDTLS WPDFVFKKPI VKTSLKLYSL AQRNNHTITT SNSISLSLVS SFNTEATSNL 60
61 YTRFFKIASS FRVSYLMGCL LDLFVPSIRT GALKAMKKCY LSAHSNIPFK DLMKILAATS 120
121 EDELVQCCKM HGLKIEYIGE QPSAVVLNRK TVITGMIVVS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
