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View Structure Prediction Details

Protein: DIR22_ARATH
Organism: Arabidopsis thaliana
Length: 125 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIR22_ARATH.

Description E-value Query
Range
Subject
Range
gi|6694707 - gi|6694707|gb|AAF25364.1|AF210068_1 dirigent-like protein [Thuja plicata]
170.0 [0..3] [125..69]
DIR20_ARATH - Dirigent protein 20 OS=Arabidopsis thaliana GN=DIR20 PE=2 SV=1
164.0 [0..1] [125..64]
gi|88771159 - gi|88771159|gb|ABD52129.1| dirigent protein pDIR18 [Picea glauca]
163.0 [0..3] [125..79]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQKAVSNSS TSFGSITMTD NALTSDVPVN STVVGQSQGF YAGAAQRELG FLMAMNFAFK  60
   61 TGKYNGSTIT ILGRNTVFSK VREMTVVGGS GIFRLARGYV EARTKWFDPK TGDATVEYNC 120
  121 YVLHY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.15
Match: 1z8kA
Description: X-ray structure of allene oxide cyclase from Arabidopsis thaliana at3g25770
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle